Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 AC108073.2-201ENST00000464002 357 ntBASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 RPL13AP23-201ENST00000480739 586 ntBASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 AC022188.1-201ENST00000620960 1664 ntBASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NIPAL1Q6NVV3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 CRYGEP-201ENST00000412192 528 ntBASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 AC009947.1-201ENST00000444350 727 ntBASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 AP002490.2-201ENST00000524791 560 ntBASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 AC106730.1-201ENST00000566722 1090 ntBASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NIPAL1Q6NVV3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 AL603756.1-201ENST00000606511 2163 ntBASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 AC087163.2-201ENST00000457299 853 ntBASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 MIR4751-201ENST00000578027 74 ntBASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
NIPAL1Q6NVV3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms