Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 AC079328.2-201ENST00000561241 3354 ntBASIC17.34■□□□□ 0.37
LRRC38Q5VT99 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 AC006449.6-201ENST00000612330 2296 ntBASIC17.33■□□□□ 0.37
LRRC38Q5VT99 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC38Q5VT99 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC38Q5VT99 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
LRRC38Q5VT99 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LRRC38Q5VT99 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
LRRC38Q5VT99 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC38Q5VT99 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC38Q5VT99 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.33■□□□□ 0.36
LRRC38Q5VT99 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRRC38Q5VT99 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 AC079781.3-201ENST00000449110 356 ntBASIC17.32■□□□□ 0.36
LRRC38Q5VT99 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 AC117500.6-201ENST00000624871 588 ntBASIC17.32■□□□□ 0.36
LRRC38Q5VT99 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC38Q5VT99 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 MIR3909-201ENST00000579518 119 ntBASIC17.31■□□□□ 0.36
LRRC38Q5VT99 RN7SL510P-201ENST00000581311 263 ntBASIC17.31■□□□□ 0.36
LRRC38Q5VT99 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 AL365203.3-201ENST00000609742 2057 ntBASIC17.31■□□□□ 0.36
LRRC38Q5VT99 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms