Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBM48Q5RL73 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM48Q5RL73 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM48Q5RL73 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM48Q5RL73 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBM48Q5RL73 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 AC016027.1-202ENST00000607927 1699 ntBASIC15.29■□□□□ 0.04
RBM48Q5RL73 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBM48Q5RL73 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 AL353692.3-201ENST00000407031 1396 ntBASIC15.29■□□□□ 0.04
RBM48Q5RL73 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBM48Q5RL73 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 AL158047.1-201ENST00000445918 881 ntBASIC15.29■□□□□ 0.04
RBM48Q5RL73 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM48Q5RL73 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBM48Q5RL73 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBM48Q5RL73 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBM48Q5RL73 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 AC067930.6-201ENST00000623257 4947 ntBASIC15.29■□□□□ 0.04
RBM48Q5RL73 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.29■□□□□ 0.04
RBM48Q5RL73 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 TSPY14P-201ENST00000303979 915 ntBASIC15.28■□□□□ 0.04
RBM48Q5RL73 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 IGHGP-201ENST00000390555 1178 ntBASIC15.28■□□□□ 0.04
RBM48Q5RL73 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 MIR1238-201ENST00000408483 83 ntBASIC15.28■□□□□ 0.04
RBM48Q5RL73 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 AC073912.3-201ENST00000624414 853 ntBASIC15.28■□□□□ 0.04
RBM48Q5RL73 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 AC138035.3-201ENST00000622706 2791 ntBASIC15.28■□□□□ 0.04
RBM48Q5RL73 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.28■□□□□ 0.04
RBM48Q5RL73 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBM48Q5RL73 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RBM48Q5RL73 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM48Q5RL73 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RBM48Q5RL73 PRAL-201ENST00000624952 3286 ntBASIC15.27■□□□□ 0.04
RBM48Q5RL73 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RBM48Q5RL73 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.27■□□□□ 0.04
RBM48Q5RL73 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBM48Q5RL73 SSR4P1-203ENST00000599569 2260 ntBASIC15.27■□□□□ 0.04
RBM48Q5RL73 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBM48Q5RL73 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms