Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 MIR3909-201ENST00000579518 119 ntBASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 AL671883.3-201ENST00000603274 991 ntBASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 AC092919.2-201ENST00000623631 1645 ntBASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 MIR574-201ENST00000385209 96 ntBASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PTPN20Q4JDL3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 AC006449.5-201ENST00000610658 2098 ntBASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 PDPK2P-202ENST00000562415 1191 ntBASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms