Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.97□□□□□ -0.01
SCN1BQ07699 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.97□□□□□ -0.01
SCN1BQ07699 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.97□□□□□ -0.01
SCN1BQ07699 AC005332.3-201ENST00000589904 676 ntBASIC14.97□□□□□ -0.01
SCN1BQ07699 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SCN1BQ07699 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 AL161772.1-201ENST00000610494 4412 ntBASIC14.97□□□□□ -0.01
SCN1BQ07699 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SCN1BQ07699 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SCN1BQ07699 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.96□□□□□ -0.01
SCN1BQ07699 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 AP002414.2-201ENST00000591780 3365 ntBASIC14.96□□□□□ -0.01
SCN1BQ07699 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 TNRC18P2-201ENST00000417666 2714 ntBASIC14.96□□□□□ -0.01
SCN1BQ07699 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.96□□□□□ -0.01
SCN1BQ07699 ALOX12P2-203ENST00000570921 1945 ntBASIC14.96□□□□□ -0.01
SCN1BQ07699 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.96□□□□□ -0.01
SCN1BQ07699 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SCN1BQ07699 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.96□□□□□ -0.01
SCN1BQ07699 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.96□□□□□ -0.01
SCN1BQ07699 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.96□□□□□ -0.01
SCN1BQ07699 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.96□□□□□ -0.01
SCN1BQ07699 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.96□□□□□ -0.01
SCN1BQ07699 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
SCN1BQ07699 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SCN1BQ07699 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SCN1BQ07699 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SCN1BQ07699 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.96□□□□□ -0.01
SCN1BQ07699 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCN1BQ07699 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SCN1BQ07699 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SCN1BQ07699 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.96□□□□□ -0.02
SCN1BQ07699 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
SCN1BQ07699 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SCN1BQ07699 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 Z83836.1-201ENST00000624605 1642 ntBASIC14.95□□□□□ -0.02
SCN1BQ07699 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SCN1BQ07699 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SCN1BQ07699 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SCN1BQ07699 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.95□□□□□ -0.02
SCN1BQ07699 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.95□□□□□ -0.02
SCN1BQ07699 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.95□□□□□ -0.02
SCN1BQ07699 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SCN1BQ07699 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.95□□□□□ -0.02
SCN1BQ07699 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.95□□□□□ -0.02
SCN1BQ07699 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.95□□□□□ -0.02
SCN1BQ07699 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.95□□□□□ -0.02
SCN1BQ07699 AC073347.1-201ENST00000421633 2643 ntBASIC14.95□□□□□ -0.02
SCN1BQ07699 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.95□□□□□ -0.02
SCN1BQ07699 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.95□□□□□ -0.02
SCN1BQ07699 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.95□□□□□ -0.02
SCN1BQ07699 MTCL1P1-201ENST00000446207 792 ntBASIC14.95□□□□□ -0.02
SCN1BQ07699 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.95□□□□□ -0.02
SCN1BQ07699 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SCN1BQ07699 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.95□□□□□ -0.02
SCN1BQ07699 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms