Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
HMGCS1Q01581 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HMGCS1Q01581 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HMGCS1Q01581 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HMGCS1Q01581 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.14■□□□□ 0.18
HMGCS1Q01581 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 LAGE3P1-201ENST00000425356 484 ntBASIC16.14■□□□□ 0.17
HMGCS1Q01581 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 AL805961.1-202ENST00000641562 540 ntBASIC16.14■□□□□ 0.17
HMGCS1Q01581 AC107918.4-202ENST00000641623 219 ntBASIC16.14■□□□□ 0.17
HMGCS1Q01581 AF228730.7-201ENST00000641842 219 ntBASIC16.14■□□□□ 0.17
HMGCS1Q01581 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
HMGCS1Q01581 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 AL512652.2-201ENST00000625156 1716 ntBASIC16.14■□□□□ 0.17
HMGCS1Q01581 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCS1Q01581 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 RPS2P1-201ENST00000434010 821 ntBASIC16.13■□□□□ 0.17
HMGCS1Q01581 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 MIR4492-201ENST00000581627 80 ntBASIC16.13■□□□□ 0.17
HMGCS1Q01581 AC006557.2-201ENST00000592985 1240 ntBASIC16.13■□□□□ 0.17
HMGCS1Q01581 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 AL691432.3-201ENST00000621860 400 ntBASIC16.13■□□□□ 0.17
HMGCS1Q01581 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HMGCS1Q01581 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCS1Q01581 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCS1Q01581 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCS1Q01581 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGCS1Q01581 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGCS1Q01581 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCS1Q01581 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGCS1Q01581 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms