Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP1S1P61966 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.8■□□□□ 0.28
AP1S1P61966 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
AP1S1P61966 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP1S1P61966 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 AC016027.1-202ENST00000607927 1699 ntBASIC16.79■□□□□ 0.28
AP1S1P61966 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.79■□□□□ 0.28
AP1S1P61966 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.79■□□□□ 0.28
AP1S1P61966 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 KRT18P34-201ENST00000488218 1270 ntBASIC16.79■□□□□ 0.28
AP1S1P61966 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.79■□□□□ 0.28
AP1S1P61966 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.79■□□□□ 0.28
AP1S1P61966 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.79■□□□□ 0.28
AP1S1P61966 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP1S1P61966 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 GPAA1P2-202ENST00000606848 1787 ntBASIC16.79■□□□□ 0.28
AP1S1P61966 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
AP1S1P61966 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.79■□□□□ 0.28
AP1S1P61966 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP1S1P61966 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S1P61966 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
AP1S1P61966 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.78■□□□□ 0.28
AP1S1P61966 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.78■□□□□ 0.28
AP1S1P61966 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.78■□□□□ 0.28
AP1S1P61966 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.78■□□□□ 0.28
AP1S1P61966 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
AP1S1P61966 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.78■□□□□ 0.28
AP1S1P61966 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.78■□□□□ 0.28
AP1S1P61966 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.78■□□□□ 0.28
AP1S1P61966 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.78■□□□□ 0.28
AP1S1P61966 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.78■□□□□ 0.28
AP1S1P61966 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 GGT4P-201ENST00000623672 1708 ntBASIC16.78■□□□□ 0.28
AP1S1P61966 NFIC-211ENST00000641145 8399 ntBASIC16.78■□□□□ 0.28
AP1S1P61966 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S1P61966 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S1P61966 AGGF1P2-201ENST00000426656 2106 ntBASIC16.78■□□□□ 0.28
AP1S1P61966 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
AP1S1P61966 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S1P61966 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.77■□□□□ 0.28
AP1S1P61966 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S1P61966 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S1P61966 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms