Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.27■□□□□ 0.04
CXCR4P61073 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.27■□□□□ 0.04
CXCR4P61073 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.27■□□□□ 0.04
CXCR4P61073 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.27■□□□□ 0.04
CXCR4P61073 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.27■□□□□ 0.04
CXCR4P61073 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CXCR4P61073 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CXCR4P61073 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CXCR4P61073 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CXCR4P61073 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.27■□□□□ 0.04
CXCR4P61073 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CXCR4P61073 CDC14C-201ENST00000428251 1719 ntBASIC15.27■□□□□ 0.04
CXCR4P61073 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CXCR4P61073 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CXCR4P61073 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CXCR4P61073 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CXCR4P61073 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CXCR4P61073 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.27■□□□□ 0.04
CXCR4P61073 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.27■□□□□ 0.04
CXCR4P61073 AL645929.1-201ENST00000420084 975 ntBASIC15.27■□□□□ 0.04
CXCR4P61073 TSPY22P-201ENST00000427496 604 ntBASIC15.27■□□□□ 0.04
CXCR4P61073 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.27■□□□□ 0.04
CXCR4P61073 RN7SL606P-201ENST00000472779 293 ntBASIC15.27■□□□□ 0.04
CXCR4P61073 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.27■□□□□ 0.04
CXCR4P61073 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CXCR4P61073 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CXCR4P61073 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.27■□□□□ 0.04
CXCR4P61073 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.27■□□□□ 0.04
CXCR4P61073 AC005336.2-201ENST00000593183 939 ntBASIC15.27■□□□□ 0.04
CXCR4P61073 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.27■□□□□ 0.04
CXCR4P61073 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.27■□□□□ 0.04
CXCR4P61073 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CXCR4P61073 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CXCR4P61073 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CXCR4P61073 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CXCR4P61073 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.27■□□□□ 0.04
CXCR4P61073 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CXCR4P61073 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.27■□□□□ 0.03
CXCR4P61073 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CXCR4P61073 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CXCR4P61073 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CXCR4P61073 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.27■□□□□ 0.03
CXCR4P61073 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CXCR4P61073 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CXCR4P61073 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.26■□□□□ 0.03
CXCR4P61073 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 KRT8P49-201ENST00000604166 1432 ntBASIC15.26■□□□□ 0.03
CXCR4P61073 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CXCR4P61073 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
CXCR4P61073 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.26■□□□□ 0.03
CXCR4P61073 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CXCR4P61073 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CXCR4P61073 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CXCR4P61073 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 AC003669.1-201ENST00000334569 611 ntBASIC15.26■□□□□ 0.03
CXCR4P61073 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.26■□□□□ 0.03
CXCR4P61073 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.26■□□□□ 0.03
CXCR4P61073 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.26■□□□□ 0.03
CXCR4P61073 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.26■□□□□ 0.03
CXCR4P61073 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.26■□□□□ 0.03
CXCR4P61073 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.26■□□□□ 0.03
CXCR4P61073 AC011840.4-201ENST00000578471 627 ntBASIC15.26■□□□□ 0.03
CXCR4P61073 AL353801.3-201ENST00000609898 542 ntBASIC15.26■□□□□ 0.03
CXCR4P61073 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.26■□□□□ 0.03
CXCR4P61073 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CXCR4P61073 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 PPT1-215ENST00000641471 2368 ntBASIC15.26■□□□□ 0.03
CXCR4P61073 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CXCR4P61073 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CXCR4P61073 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.26■□□□□ 0.03
CXCR4P61073 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CXCR4P61073 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.25■□□□□ 0.03
CXCR4P61073 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.25■□□□□ 0.03
CXCR4P61073 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.25■□□□□ 0.03
CXCR4P61073 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 LINC02447-202ENST00000501888 2146 ntBASIC15.25■□□□□ 0.03
CXCR4P61073 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CXCR4P61073 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms