Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.8□□□□□ -0.52
CKS1BP61024 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 PVRIG2P-201ENST00000435460 978 ntBASIC11.8□□□□□ -0.52
CKS1BP61024 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 AC009947.2-201ENST00000444014 672 ntBASIC11.8□□□□□ -0.52
CKS1BP61024 TSPY20P-201ENST00000450910 630 ntBASIC11.8□□□□□ -0.52
CKS1BP61024 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CKS1BP61024 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS1BP61024 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC11.8□□□□□ -0.52
CKS1BP61024 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.8□□□□□ -0.52
CKS1BP61024 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS1BP61024 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 MED29-202ENST00000594368 1471 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS1BP61024 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS1BP61024 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS1BP61024 AC106886.4-201ENST00000623557 2502 ntBASIC11.8□□□□□ -0.52
CKS1BP61024 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS1BP61024 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 AL391807.1-203ENST00000604392 2365 ntBASIC11.79□□□□□ -0.52
CKS1BP61024 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS1BP61024 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 AL390955.1-201ENST00000428694 934 ntBASIC11.79□□□□□ -0.52
CKS1BP61024 KRT18P65-201ENST00000439811 1286 ntBASIC11.79□□□□□ -0.52
CKS1BP61024 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS1BP61024 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CKS1BP61024 AC113404.2-201ENST00000507884 177 ntBASIC11.79□□□□□ -0.52
CKS1BP61024 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.79□□□□□ -0.52
CKS1BP61024 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS1BP61024 EGLN1P1-201ENST00000531623 762 ntBASIC11.79□□□□□ -0.52
CKS1BP61024 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS1BP61024 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS1BP61024 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.79□□□□□ -0.52
CKS1BP61024 NEK4P2-201ENST00000580004 1012 ntBASIC11.79□□□□□ -0.52
CKS1BP61024 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CKS1BP61024 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS1BP61024 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.79□□□□□ -0.52
CKS1BP61024 BX276092.7-203ENST00000637198 1536 ntBASIC11.79□□□□□ -0.52
CKS1BP61024 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CKS1BP61024 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CKS1BP61024 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms