Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
WNT3AP56704 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
WNT3AP56704 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
WNT3AP56704 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
WNT3AP56704 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.88■□□□□ 0.29
WNT3AP56704 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
WNT3AP56704 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
WNT3AP56704 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
WNT3AP56704 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
WNT3AP56704 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
WNT3AP56704 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.87■□□□□ 0.29
WNT3AP56704 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.87■□□□□ 0.29
WNT3AP56704 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
WNT3AP56704 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.87■□□□□ 0.29
WNT3AP56704 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.87■□□□□ 0.29
WNT3AP56704 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.87■□□□□ 0.29
WNT3AP56704 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.87■□□□□ 0.29
WNT3AP56704 AC106730.1-201ENST00000566722 1090 ntBASIC16.87■□□□□ 0.29
WNT3AP56704 AC018845.2-201ENST00000568326 409 ntBASIC16.87■□□□□ 0.29
WNT3AP56704 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
WNT3AP56704 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.87■□□□□ 0.29
WNT3AP56704 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.87■□□□□ 0.29
WNT3AP56704 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
WNT3AP56704 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.87■□□□□ 0.29
WNT3AP56704 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.87■□□□□ 0.29
WNT3AP56704 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
WNT3AP56704 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.87■□□□□ 0.29
WNT3AP56704 AL662844.4-201ENST00000606367 2838 ntBASIC16.87■□□□□ 0.29
WNT3AP56704 AC005052.1-201ENST00000625181 2492 ntBASIC16.87■□□□□ 0.29
WNT3AP56704 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
WNT3AP56704 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.86■□□□□ 0.29
WNT3AP56704 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.86■□□□□ 0.29
WNT3AP56704 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.86■□□□□ 0.29
WNT3AP56704 RNU1-129P-201ENST00000384064 167 ntBASIC16.86■□□□□ 0.29
WNT3AP56704 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.86■□□□□ 0.29
WNT3AP56704 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.86■□□□□ 0.29
WNT3AP56704 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.86■□□□□ 0.29
WNT3AP56704 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.86■□□□□ 0.29
WNT3AP56704 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.86■□□□□ 0.29
WNT3AP56704 U1.21-201ENST00000580816 167 ntBASIC16.86■□□□□ 0.29
WNT3AP56704 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
WNT3AP56704 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.86■□□□□ 0.29
WNT3AP56704 AC023141.13-201ENST00000604991 943 ntBASIC16.86■□□□□ 0.29
WNT3AP56704 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
WNT3AP56704 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
WNT3AP56704 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
WNT3AP56704 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
WNT3AP56704 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
WNT3AP56704 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
WNT3AP56704 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms