Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.43□□□□□ -0.42
CMC4P56277 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.43□□□□□ -0.42
CMC4P56277 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.43□□□□□ -0.42
CMC4P56277 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CMC4P56277 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.43□□□□□ -0.42
CMC4P56277 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CMC4P56277 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CMC4P56277 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.43□□□□□ -0.42
CMC4P56277 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CMC4P56277 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.43□□□□□ -0.42
CMC4P56277 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.43□□□□□ -0.42
CMC4P56277 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CMC4P56277 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.43□□□□□ -0.42
CMC4P56277 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.43□□□□□ -0.42
CMC4P56277 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.43□□□□□ -0.42
CMC4P56277 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.43□□□□□ -0.42
CMC4P56277 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.43□□□□□ -0.42
CMC4P56277 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CMC4P56277 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CMC4P56277 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CMC4P56277 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CMC4P56277 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CMC4P56277 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 PCDHB17P-201ENST00000539533 2393 ntBASIC12.42□□□□□ -0.42
CMC4P56277 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 YBX2P1-201ENST00000394192 760 ntBASIC12.42□□□□□ -0.42
CMC4P56277 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.42□□□□□ -0.42
CMC4P56277 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.42□□□□□ -0.42
CMC4P56277 RN7SL589P-201ENST00000481268 310 ntBASIC12.42□□□□□ -0.42
CMC4P56277 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.42□□□□□ -0.42
CMC4P56277 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.42□□□□□ -0.42
CMC4P56277 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
CMC4P56277 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.42□□□□□ -0.42
CMC4P56277 AP002472.1-201ENST00000577490 586 ntBASIC12.42□□□□□ -0.42
CMC4P56277 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.42□□□□□ -0.42
CMC4P56277 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CMC4P56277 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.42□□□□□ -0.42
CMC4P56277 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CMC4P56277 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.42□□□□□ -0.42
CMC4P56277 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
CMC4P56277 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CMC4P56277 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CMC4P56277 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms