Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.93□□□□□ -0.02
GFRA1P56159 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
GFRA1P56159 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GFRA1P56159 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.93□□□□□ -0.02
GFRA1P56159 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.93□□□□□ -0.02
GFRA1P56159 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.93□□□□□ -0.02
GFRA1P56159 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.93□□□□□ -0.02
GFRA1P56159 KRT18P32-201ENST00000424695 1287 ntBASIC14.93□□□□□ -0.02
GFRA1P56159 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.93□□□□□ -0.02
GFRA1P56159 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GFRA1P56159 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.93□□□□□ -0.02
GFRA1P56159 AL138918.1-201ENST00000568306 659 ntBASIC14.93□□□□□ -0.02
GFRA1P56159 AP000842.3-202ENST00000569238 1080 ntBASIC14.93□□□□□ -0.02
GFRA1P56159 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.93□□□□□ -0.02
GFRA1P56159 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.93□□□□□ -0.02
GFRA1P56159 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
GFRA1P56159 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.93□□□□□ -0.02
GFRA1P56159 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 RNF216P1-203ENST00000404404 2427 ntBASIC14.93□□□□□ -0.02
GFRA1P56159 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.93□□□□□ -0.02
GFRA1P56159 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
GFRA1P56159 AL031731.1-201ENST00000642131 2094 ntBASIC14.93□□□□□ -0.02
GFRA1P56159 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.92□□□□□ -0.02
GFRA1P56159 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.92□□□□□ -0.02
GFRA1P56159 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GFRA1P56159 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.92□□□□□ -0.02
GFRA1P56159 GPS2P2-201ENST00000430745 888 ntBASIC14.92□□□□□ -0.02
GFRA1P56159 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.92□□□□□ -0.02
GFRA1P56159 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GFRA1P56159 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.92□□□□□ -0.02
GFRA1P56159 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.92□□□□□ -0.02
GFRA1P56159 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
GFRA1P56159 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.92□□□□□ -0.02
GFRA1P56159 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 AC073389.1-201ENST00000595595 795 ntBASIC14.92□□□□□ -0.02
GFRA1P56159 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.92□□□□□ -0.02
GFRA1P56159 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
GFRA1P56159 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.92□□□□□ -0.02
GFRA1P56159 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GFRA1P56159 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.92□□□□□ -0.02
GFRA1P56159 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GFRA1P56159 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GFRA1P56159 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.92□□□□□ -0.02
GFRA1P56159 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GFRA1P56159 UXT-AS1-201ENST00000590504 1525 ntBASIC14.92□□□□□ -0.02
GFRA1P56159 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.91□□□□□ -0.02
GFRA1P56159 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GFRA1P56159 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GFRA1P56159 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.91□□□□□ -0.02
GFRA1P56159 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
GFRA1P56159 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GFRA1P56159 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.91□□□□□ -0.02
GFRA1P56159 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.91□□□□□ -0.02
GFRA1P56159 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GFRA1P56159 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.91□□□□□ -0.02
GFRA1P56159 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GFRA1P56159 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.91□□□□□ -0.02
GFRA1P56159 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
GFRA1P56159 AC105233.2-201ENST00000523697 349 ntBASIC14.91□□□□□ -0.02
GFRA1P56159 AC109322.1-201ENST00000524499 1264 ntBASIC14.91□□□□□ -0.02
GFRA1P56159 AF228730.5-201ENST00000530288 346 ntBASIC14.91□□□□□ -0.02
GFRA1P56159 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.91□□□□□ -0.02
GFRA1P56159 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.91□□□□□ -0.02
GFRA1P56159 LINC00628-201ENST00000628516 1289 ntBASIC14.91□□□□□ -0.02
GFRA1P56159 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GFRA1P56159 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms