Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDH8P55286 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CDH8P55286 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH8P55286 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH8P55286 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH8P55286 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDH8P55286 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 ELL2P1-201ENST00000413990 1906 ntBASIC17.8■□□□□ 0.44
CDH8P55286 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH8P55286 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH8P55286 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH8P55286 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH8P55286 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 MIR1233-2-201ENST00000408138 82 ntBASIC17.8■□□□□ 0.44
CDH8P55286 MIR1233-1-201ENST00000408722 82 ntBASIC17.8■□□□□ 0.44
CDH8P55286 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.8■□□□□ 0.44
CDH8P55286 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.8■□□□□ 0.44
CDH8P55286 AC109635.5-201ENST00000533593 962 ntBASIC17.8■□□□□ 0.44
CDH8P55286 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH8P55286 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CDH8P55286 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.8■□□□□ 0.44
CDH8P55286 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH8P55286 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CDH8P55286 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH8P55286 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH8P55286 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CDH8P55286 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH8P55286 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 PCDHA14-201ENST00000506751 2298 ntBASIC17.79■□□□□ 0.44
CDH8P55286 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH8P55286 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH8P55286 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH8P55286 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDH8P55286 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH8P55286 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH8P55286 AL671277.1-201ENST00000429656 993 ntBASIC17.79■□□□□ 0.44
CDH8P55286 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH8P55286 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.79■□□□□ 0.44
CDH8P55286 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.79■□□□□ 0.44
CDH8P55286 YBX1P5-201ENST00000509441 847 ntBASIC17.79■□□□□ 0.44
CDH8P55286 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH8P55286 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDH8P55286 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH8P55286 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 MIR3909-201ENST00000579518 119 ntBASIC17.79■□□□□ 0.44
CDH8P55286 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH8P55286 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH8P55286 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDH8P55286 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CDH8P55286 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH8P55286 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDH8P55286 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDH8P55286 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH8P55286 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH8P55286 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH8P55286 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH8P55286 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH8P55286 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH8P55286 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH8P55286 GGT4P-201ENST00000623672 1708 ntBASIC17.78■□□□□ 0.44
CDH8P55286 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH8P55286 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH8P55286 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH8P55286 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH8P55286 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH8P55286 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH8P55286 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH8P55286 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH8P55286 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms