Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.93■□□□□ 0.14
NR1H2P55055 GUSBP12-201ENST00000513727 720 ntBASIC15.93■□□□□ 0.14
NR1H2P55055 AP000867.3-201ENST00000524675 377 ntBASIC15.93■□□□□ 0.14
NR1H2P55055 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.93■□□□□ 0.14
NR1H2P55055 TPSP2-201ENST00000561760 610 ntBASIC15.93■□□□□ 0.14
NR1H2P55055 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.93■□□□□ 0.14
NR1H2P55055 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NR1H2P55055 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.93■□□□□ 0.14
NR1H2P55055 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
NR1H2P55055 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.93■□□□□ 0.14
NR1H2P55055 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NR1H2P55055 AC068587.6-202ENST00000641839 5619 ntBASIC15.93■□□□□ 0.14
NR1H2P55055 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.93■□□□□ 0.14
NR1H2P55055 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
NR1H2P55055 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NR1H2P55055 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NR1H2P55055 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 SLC25A1P3-201ENST00000395415 828 ntBASIC15.92■□□□□ 0.14
NR1H2P55055 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.92■□□□□ 0.14
NR1H2P55055 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 AL845331.1-201ENST00000424978 1190 ntBASIC15.92■□□□□ 0.14
NR1H2P55055 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.92■□□□□ 0.14
NR1H2P55055 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.92■□□□□ 0.14
NR1H2P55055 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 AC124947.2-201ENST00000547118 1133 ntBASIC15.92■□□□□ 0.14
NR1H2P55055 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.92■□□□□ 0.14
NR1H2P55055 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H2P55055 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H2P55055 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.92■□□□□ 0.14
NR1H2P55055 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H2P55055 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.92■□□□□ 0.14
NR1H2P55055 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NR1H2P55055 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR1H2P55055 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H2P55055 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
NR1H2P55055 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NR1H2P55055 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H2P55055 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NR1H2P55055 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NR1H2P55055 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.91■□□□□ 0.14
NR1H2P55055 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NR1H2P55055 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H2P55055 IGHGP-201ENST00000390555 1178 ntBASIC15.91■□□□□ 0.14
NR1H2P55055 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.91■□□□□ 0.14
NR1H2P55055 TOB2P1-201ENST00000469761 992 ntBASIC15.91■□□□□ 0.14
NR1H2P55055 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 AC104819.1-201ENST00000504587 486 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms