Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.96□□□□□ -0.17
EFNA4P52798 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA4P52798 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA4P52798 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA4P52798 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA4P52798 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA4P52798 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
EFNA4P52798 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.96□□□□□ -0.17
EFNA4P52798 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA4P52798 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
EFNA4P52798 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
EFNA4P52798 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNA4P52798 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
EFNA4P52798 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
EFNA4P52798 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
EFNA4P52798 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
EFNA4P52798 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
EFNA4P52798 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.96□□□□□ -0.18
EFNA4P52798 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.96□□□□□ -0.18
EFNA4P52798 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
EFNA4P52798 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.95□□□□□ -0.18
EFNA4P52798 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
EFNA4P52798 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
EFNA4P52798 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
EFNA4P52798 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.95□□□□□ -0.18
EFNA4P52798 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
EFNA4P52798 AL353705.2-201ENST00000428243 662 ntBASIC13.95□□□□□ -0.18
EFNA4P52798 AC092580.3-201ENST00000430932 139 ntBASIC13.95□□□□□ -0.18
EFNA4P52798 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.95□□□□□ -0.18
EFNA4P52798 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.95□□□□□ -0.18
EFNA4P52798 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNA4P52798 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNA4P52798 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.95□□□□□ -0.18
EFNA4P52798 AC239800.4-201ENST00000603712 296 ntBASIC13.95□□□□□ -0.18
EFNA4P52798 SPTSSB-204ENST00000617024 1292 ntBASIC13.95□□□□□ -0.18
EFNA4P52798 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
EFNA4P52798 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 KRT8P39-201ENST00000396270 1433 ntBASIC13.95□□□□□ -0.18
EFNA4P52798 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
EFNA4P52798 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.95□□□□□ -0.18
EFNA4P52798 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.95□□□□□ -0.18
EFNA4P52798 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
EFNA4P52798 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.95□□□□□ -0.18
EFNA4P52798 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNA4P52798 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA4P52798 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
EFNA4P52798 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 AC092053.1-201ENST00000605787 1936 ntBASIC13.94□□□□□ -0.18
EFNA4P52798 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
EFNA4P52798 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.94□□□□□ -0.18
EFNA4P52798 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.94□□□□□ -0.18
EFNA4P52798 FAM220BP-201ENST00000377689 816 ntBASIC13.94□□□□□ -0.18
EFNA4P52798 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
EFNA4P52798 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.94□□□□□ -0.18
EFNA4P52798 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.94□□□□□ -0.18
EFNA4P52798 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.94□□□□□ -0.18
EFNA4P52798 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 UGT1A2P-201ENST00000454886 866 ntBASIC13.94□□□□□ -0.18
EFNA4P52798 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA4P52798 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.94□□□□□ -0.18
EFNA4P52798 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
EFNA4P52798 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.94□□□□□ -0.18
EFNA4P52798 AC098859.1-201ENST00000502915 1238 ntBASIC13.94□□□□□ -0.18
EFNA4P52798 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms