Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 PCDHA14-201ENST00000506751 2298 ntBASIC14.9□□□□□ -0.02
CSNK1A1P48729 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.9□□□□□ -0.02
CSNK1A1P48729 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 VN2R19P-201ENST00000442399 1052 ntBASIC14.9□□□□□ -0.02
CSNK1A1P48729 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 MIR4492-201ENST00000581627 80 ntBASIC14.9□□□□□ -0.02
CSNK1A1P48729 CYP2A7P1-201ENST00000595391 815 ntBASIC14.9□□□□□ -0.02
CSNK1A1P48729 Z83851.2-201ENST00000609564 659 ntBASIC14.9□□□□□ -0.02
CSNK1A1P48729 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 SLC22A20-204ENST00000530038 1673 ntBASIC14.9□□□□□ -0.02
CSNK1A1P48729 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 AC006538.1-201ENST00000567905 1585 ntBASIC14.9□□□□□ -0.02
CSNK1A1P48729 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CSNK1A1P48729 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1A1P48729 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 FLJ16779-201ENST00000612722 7638 ntBASIC14.89□□□□□ -0.03
CSNK1A1P48729 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 FDX1P1-201ENST00000449115 551 ntBASIC14.89□□□□□ -0.03
CSNK1A1P48729 CXCL1P1-201ENST00000502804 216 ntBASIC14.89□□□□□ -0.03
CSNK1A1P48729 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 UBALD1-205ENST00000590891 2641 ntBASIC14.89□□□□□ -0.03
CSNK1A1P48729 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CSNK1A1P48729 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1A1P48729 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms