Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.78■□□□□ 0.12
GABRA4P48169 GGT4P-201ENST00000623672 1708 ntBASIC15.78■□□□□ 0.12
GABRA4P48169 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
GABRA4P48169 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.78■□□□□ 0.12
GABRA4P48169 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.78■□□□□ 0.12
GABRA4P48169 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
GABRA4P48169 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.78■□□□□ 0.12
GABRA4P48169 AC105233.2-201ENST00000523697 349 ntBASIC15.78■□□□□ 0.12
GABRA4P48169 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 AF228730.5-201ENST00000530288 346 ntBASIC15.78■□□□□ 0.12
GABRA4P48169 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.78■□□□□ 0.12
GABRA4P48169 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.78■□□□□ 0.12
GABRA4P48169 AL355385.1-201ENST00000606123 409 ntBASIC15.78■□□□□ 0.12
GABRA4P48169 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
GABRA4P48169 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GABRA4P48169 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
GABRA4P48169 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.77■□□□□ 0.12
GABRA4P48169 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GABRA4P48169 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
GABRA4P48169 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GABRA4P48169 AL031731.1-201ENST00000642131 2094 ntBASIC15.77■□□□□ 0.12
GABRA4P48169 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
GABRA4P48169 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GABRA4P48169 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.77■□□□□ 0.12
GABRA4P48169 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.77■□□□□ 0.12
GABRA4P48169 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
GABRA4P48169 AC106820.2-201ENST00000563775 3264 ntBASIC15.77■□□□□ 0.12
GABRA4P48169 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.77■□□□□ 0.12
GABRA4P48169 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
GABRA4P48169 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.77■□□□□ 0.12
GABRA4P48169 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
GABRA4P48169 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
GABRA4P48169 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.77■□□□□ 0.12
GABRA4P48169 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.77■□□□□ 0.12
GABRA4P48169 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.77■□□□□ 0.12
GABRA4P48169 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.77■□□□□ 0.12
GABRA4P48169 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.77■□□□□ 0.12
GABRA4P48169 AC025678.2-201ENST00000562061 970 ntBASIC15.77■□□□□ 0.12
GABRA4P48169 AC026150.2-201ENST00000564693 1156 ntBASIC15.77■□□□□ 0.12
GABRA4P48169 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
GABRA4P48169 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.77■□□□□ 0.12
GABRA4P48169 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.77■□□□□ 0.11
GABRA4P48169 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.77■□□□□ 0.11
GABRA4P48169 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.77■□□□□ 0.11
GABRA4P48169 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GABRA4P48169 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
GABRA4P48169 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GABRA4P48169 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
GABRA4P48169 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.77■□□□□ 0.11
GABRA4P48169 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GABRA4P48169 AC073439.1-201ENST00000624121 1774 ntBASIC15.77■□□□□ 0.11
GABRA4P48169 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GABRA4P48169 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
GABRA4P48169 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.76■□□□□ 0.11
GABRA4P48169 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.76■□□□□ 0.11
GABRA4P48169 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GABRA4P48169 OR6D1P-202ENST00000641007 5290 ntBASIC15.76■□□□□ 0.11
GABRA4P48169 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GABRA4P48169 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GABRA4P48169 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GABRA4P48169 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GABRA4P48169 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.76■□□□□ 0.11
GABRA4P48169 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GABRA4P48169 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms