Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.59■□□□□ 0.41
GRIK1P39086 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.59■□□□□ 0.41
GRIK1P39086 AL627223.1-201ENST00000416693 442 ntBASIC17.59■□□□□ 0.41
GRIK1P39086 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.59■□□□□ 0.41
GRIK1P39086 SPCS2P4-201ENST00000436160 681 ntBASIC17.59■□□□□ 0.41
GRIK1P39086 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GRIK1P39086 AC004449.1-201ENST00000564240 433 ntBASIC17.59■□□□□ 0.41
GRIK1P39086 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.59■□□□□ 0.41
GRIK1P39086 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.59■□□□□ 0.41
GRIK1P39086 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.59■□□□□ 0.41
GRIK1P39086 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GRIK1P39086 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
GRIK1P39086 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GRIK1P39086 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
GRIK1P39086 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.58■□□□□ 0.41
GRIK1P39086 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
GRIK1P39086 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
GRIK1P39086 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GRIK1P39086 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.58■□□□□ 0.41
GRIK1P39086 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.58■□□□□ 0.41
GRIK1P39086 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
GRIK1P39086 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GRIK1P39086 KRT8P39-201ENST00000396270 1433 ntBASIC17.58■□□□□ 0.41
GRIK1P39086 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
GRIK1P39086 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
GRIK1P39086 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GRIK1P39086 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.58■□□□□ 0.4
GRIK1P39086 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.58■□□□□ 0.4
GRIK1P39086 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GRIK1P39086 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.58■□□□□ 0.4
GRIK1P39086 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.58■□□□□ 0.4
GRIK1P39086 AC093520.2-201ENST00000561830 333 ntBASIC17.58■□□□□ 0.4
GRIK1P39086 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.58■□□□□ 0.4
GRIK1P39086 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
GRIK1P39086 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GRIK1P39086 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GRIK1P39086 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
GRIK1P39086 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
GRIK1P39086 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
GRIK1P39086 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
GRIK1P39086 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GRIK1P39086 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GRIK1P39086 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.58■□□□□ 0.4
GRIK1P39086 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 UXT-AS1-201ENST00000590504 1525 ntBASIC17.57■□□□□ 0.4
GRIK1P39086 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
GRIK1P39086 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
GRIK1P39086 AC005915.1-201ENST00000624912 2018 ntBASIC17.57■□□□□ 0.4
GRIK1P39086 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
GRIK1P39086 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 AL139400.1-201ENST00000366220 510 ntBASIC17.57■□□□□ 0.4
GRIK1P39086 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.57■□□□□ 0.4
GRIK1P39086 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.57■□□□□ 0.4
GRIK1P39086 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.57■□□□□ 0.4
GRIK1P39086 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.57■□□□□ 0.4
GRIK1P39086 AC027796.2-201ENST00000575326 344 ntBASIC17.57■□□□□ 0.4
GRIK1P39086 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
GRIK1P39086 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
GRIK1P39086 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
GRIK1P39086 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.57■□□□□ 0.4
GRIK1P39086 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
GRIK1P39086 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GRIK1P39086 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
GRIK1P39086 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GRIK1P39086 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.57■□□□□ 0.4
GRIK1P39086 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.56■□□□□ 0.4
GRIK1P39086 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.56■□□□□ 0.4
GRIK1P39086 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GRIK1P39086 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GRIK1P39086 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GRIK1P39086 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.56■□□□□ 0.4
GRIK1P39086 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.56■□□□□ 0.4
GRIK1P39086 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.56■□□□□ 0.4
GRIK1P39086 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GRIK1P39086 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GRIK1P39086 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.56■□□□□ 0.4
GRIK1P39086 KRT18P32-201ENST00000424695 1287 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms