Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.78■□□□□ 0.92
RFC4P35249 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RFC4P35249 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.78■□□□□ 0.92
RFC4P35249 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RFC4P35249 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RFC4P35249 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.78■□□□□ 0.92
RFC4P35249 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.78■□□□□ 0.92
RFC4P35249 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC4P35249 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RFC4P35249 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC4P35249 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC4P35249 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.78■□□□□ 0.92
RFC4P35249 AC099568.2-201ENST00000609194 695 ntBASIC20.78■□□□□ 0.92
RFC4P35249 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RFC4P35249 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC4P35249 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RFC4P35249 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC4P35249 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RFC4P35249 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 AC234783.1-201ENST00000441761 496 ntBASIC20.77■□□□□ 0.92
RFC4P35249 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.77■□□□□ 0.92
RFC4P35249 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC4P35249 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC4P35249 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.77■□□□□ 0.92
RFC4P35249 AC026979.3-201ENST00000607315 403 ntBASIC20.77■□□□□ 0.92
RFC4P35249 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RFC4P35249 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC4P35249 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.77■□□□□ 0.92
RFC4P35249 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.77■□□□□ 0.92
RFC4P35249 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC4P35249 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.77■□□□□ 0.91
RFC4P35249 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.77■□□□□ 0.91
RFC4P35249 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.77■□□□□ 0.91
RFC4P35249 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFC4P35249 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFC4P35249 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RFC4P35249 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFC4P35249 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC4P35249 AL138688.1-201ENST00000624851 1594 ntBASIC20.76■□□□□ 0.91
RFC4P35249 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC4P35249 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC4P35249 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RFC4P35249 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC4P35249 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC4P35249 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
RFC4P35249 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC4P35249 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC4P35249 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC4P35249 TMEM14DP-201ENST00000422205 345 ntBASIC20.76■□□□□ 0.91
RFC4P35249 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.76■□□□□ 0.91
RFC4P35249 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC4P35249 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.76■□□□□ 0.91
RFC4P35249 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.76■□□□□ 0.91
RFC4P35249 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.76■□□□□ 0.91
RFC4P35249 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC4P35249 AL033527.4-201ENST00000641026 673 ntBASIC20.76■□□□□ 0.91
RFC4P35249 AL109936.8-201ENST00000641772 604 ntBASIC20.76■□□□□ 0.91
RFC4P35249 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC4P35249 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC4P35249 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC4P35249 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RFC4P35249 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC4P35249 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC4P35249 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RFC4P35249 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC4P35249 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.75■□□□□ 0.91
RFC4P35249 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RFC4P35249 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC4P35249 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC4P35249 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms