Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CTNNA1P35221 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CTNNA1P35221 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 NCF1C-201ENST00000438382 1427 ntBASIC17.72■□□□□ 0.43
CTNNA1P35221 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CTNNA1P35221 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.71■□□□□ 0.43
CTNNA1P35221 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.71■□□□□ 0.43
CTNNA1P35221 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.71■□□□□ 0.43
CTNNA1P35221 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.71■□□□□ 0.43
CTNNA1P35221 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.71■□□□□ 0.43
CTNNA1P35221 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CTNNA1P35221 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.71■□□□□ 0.43
CTNNA1P35221 AC132008.2-207ENST00000454517 770 ntBASIC17.71■□□□□ 0.43
CTNNA1P35221 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.71■□□□□ 0.43
CTNNA1P35221 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.71■□□□□ 0.43
CTNNA1P35221 AC138894.3-201ENST00000603787 634 ntBASIC17.71■□□□□ 0.43
CTNNA1P35221 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CTNNA1P35221 AC068418.2-201ENST00000577309 3703 ntBASIC17.71■□□□□ 0.43
CTNNA1P35221 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 NFIC-211ENST00000641145 8399 ntBASIC17.71■□□□□ 0.43
CTNNA1P35221 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNNA1P35221 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.71■□□□□ 0.43
CTNNA1P35221 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CTNNA1P35221 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CTNNA1P35221 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTNNA1P35221 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CTNNA1P35221 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNNA1P35221 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CTNNA1P35221 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CTNNA1P35221 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.7■□□□□ 0.42
CTNNA1P35221 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTNNA1P35221 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CTNNA1P35221 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.7■□□□□ 0.42
CTNNA1P35221 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNNA1P35221 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.7■□□□□ 0.42
CTNNA1P35221 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNNA1P35221 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.7■□□□□ 0.42
CTNNA1P35221 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CTNNA1P35221 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.7■□□□□ 0.42
CTNNA1P35221 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNNA1P35221 AC064862.7-201ENST00000604520 867 ntBASIC17.7■□□□□ 0.42
CTNNA1P35221 AC091076.1-201ENST00000610741 619 ntBASIC17.7■□□□□ 0.42
CTNNA1P35221 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNNA1P35221 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNNA1P35221 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CTNNA1P35221 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNNA1P35221 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CTNNA1P35221 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.69■□□□□ 0.42
CTNNA1P35221 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CTNNA1P35221 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
CTNNA1P35221 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.69■□□□□ 0.42
CTNNA1P35221 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.69■□□□□ 0.42
CTNNA1P35221 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.69■□□□□ 0.42
CTNNA1P35221 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.69■□□□□ 0.42
CTNNA1P35221 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
CTNNA1P35221 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.69■□□□□ 0.42
CTNNA1P35221 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CTNNA1P35221 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.69■□□□□ 0.42
CTNNA1P35221 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.69■□□□□ 0.42
CTNNA1P35221 AL022326.1-202ENST00000641533 845 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms