Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LSP1P33241 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
LSP1P33241 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.82■□□□□ 0.28
LSP1P33241 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.82■□□□□ 0.28
LSP1P33241 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LSP1P33241 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.82■□□□□ 0.28
LSP1P33241 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
LSP1P33241 AL049757.1-201ENST00000616842 1596 ntBASIC16.82■□□□□ 0.28
LSP1P33241 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.82■□□□□ 0.28
LSP1P33241 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.82■□□□□ 0.28
LSP1P33241 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LSP1P33241 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LSP1P33241 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.82■□□□□ 0.28
LSP1P33241 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.82■□□□□ 0.28
LSP1P33241 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.82■□□□□ 0.28
LSP1P33241 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.82■□□□□ 0.28
LSP1P33241 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.82■□□□□ 0.28
LSP1P33241 STK25P1-201ENST00000585406 838 ntBASIC16.82■□□□□ 0.28
LSP1P33241 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.82■□□□□ 0.28
LSP1P33241 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LSP1P33241 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.82■□□□□ 0.28
LSP1P33241 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.82■□□□□ 0.28
LSP1P33241 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSP1P33241 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.81■□□□□ 0.28
LSP1P33241 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.81■□□□□ 0.28
LSP1P33241 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
LSP1P33241 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LSP1P33241 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LSP1P33241 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
LSP1P33241 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.81■□□□□ 0.28
LSP1P33241 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.81■□□□□ 0.28
LSP1P33241 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 AC010653.2-201ENST00000623505 997 ntBASIC16.81■□□□□ 0.28
LSP1P33241 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 AC066615.1-201ENST00000640911 628 ntBASIC16.81■□□□□ 0.28
LSP1P33241 AL049637.2-201ENST00000641778 930 ntBASIC16.81■□□□□ 0.28
LSP1P33241 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LSP1P33241 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.81■□□□□ 0.28
LSP1P33241 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.81■□□□□ 0.28
LSP1P33241 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSP1P33241 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
LSP1P33241 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.8■□□□□ 0.28
LSP1P33241 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
LSP1P33241 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.8■□□□□ 0.28
LSP1P33241 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.8■□□□□ 0.28
LSP1P33241 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.8■□□□□ 0.28
LSP1P33241 REXO1L8P-201ENST00000604378 1897 ntBASIC16.8■□□□□ 0.28
LSP1P33241 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 AC005089.1-201ENST00000619486 2241 ntBASIC16.8■□□□□ 0.28
LSP1P33241 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LSP1P33241 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.8■□□□□ 0.28
LSP1P33241 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LSP1P33241 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.8■□□□□ 0.28
LSP1P33241 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.8■□□□□ 0.28
LSP1P33241 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.8■□□□□ 0.28
LSP1P33241 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.8■□□□□ 0.28
LSP1P33241 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.8■□□□□ 0.28
LSP1P33241 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.8■□□□□ 0.28
LSP1P33241 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms