Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.32□□□□□ -0.12
TNFSF4P23510 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.32□□□□□ -0.12
TNFSF4P23510 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.32□□□□□ -0.12
TNFSF4P23510 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.32□□□□□ -0.12
TNFSF4P23510 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.32□□□□□ -0.12
TNFSF4P23510 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.32□□□□□ -0.12
TNFSF4P23510 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.32□□□□□ -0.12
TNFSF4P23510 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
TNFSF4P23510 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
TNFSF4P23510 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.32□□□□□ -0.12
TNFSF4P23510 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.32□□□□□ -0.12
TNFSF4P23510 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.32□□□□□ -0.12
TNFSF4P23510 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.32□□□□□ -0.12
TNFSF4P23510 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.32□□□□□ -0.12
TNFSF4P23510 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.32□□□□□ -0.12
TNFSF4P23510 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TNFSF4P23510 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 AL513477.1-201ENST00000602865 2407 ntBASIC14.32□□□□□ -0.12
TNFSF4P23510 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 AC025580.3-201ENST00000617932 1424 ntBASIC14.32□□□□□ -0.12
TNFSF4P23510 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFSF4P23510 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
TNFSF4P23510 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TNFSF4P23510 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFSF4P23510 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
TNFSF4P23510 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFSF4P23510 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFSF4P23510 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TNFSF4P23510 KRT18P2-201ENST00000447938 1258 ntBASIC14.31□□□□□ -0.12
TNFSF4P23510 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFSF4P23510 KRT19P2-202ENST00000557173 1012 ntBASIC14.31□□□□□ -0.12
TNFSF4P23510 DUX4L17-201ENST00000557360 1267 ntBASIC14.31□□□□□ -0.12
TNFSF4P23510 MIR3687-2-201ENST00000577708 61 ntBASIC14.31□□□□□ -0.12
TNFSF4P23510 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.31□□□□□ -0.12
TNFSF4P23510 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
TNFSF4P23510 MTDHP5-201ENST00000598980 586 ntBASIC14.31□□□□□ -0.12
TNFSF4P23510 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.31□□□□□ -0.12
TNFSF4P23510 MIR3687-1-201ENST00000614492 61 ntBASIC14.31□□□□□ -0.12
TNFSF4P23510 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFSF4P23510 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.31□□□□□ -0.12
TNFSF4P23510 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFSF4P23510 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFSF4P23510 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TNFSF4P23510 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TNFSF4P23510 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TNFSF4P23510 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
TNFSF4P23510 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFSF4P23510 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TNFSF4P23510 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFSF4P23510 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFSF4P23510 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TNFSF4P23510 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TNFSF4P23510 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TNFSF4P23510 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TNFSF4P23510 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFSF4P23510 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TNFSF4P23510 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFSF4P23510 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms