Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ITGB4P16144 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.03■□□□□ 0.96
ITGB4P16144 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
ITGB4P16144 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 AC060834.1-201ENST00000443027 2032 ntBASIC21.03■□□□□ 0.96
ITGB4P16144 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC21.03■□□□□ 0.96
ITGB4P16144 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC21.03■□□□□ 0.96
ITGB4P16144 HIST3H2BA-201ENST00000436555 524 ntBASIC21.03■□□□□ 0.96
ITGB4P16144 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC21.03■□□□□ 0.96
ITGB4P16144 RHOA-206ENST00000454011 889 ntTSL 2 BASIC21.03■□□□□ 0.96
ITGB4P16144 AC092658.1-201ENST00000505836 891 ntBASIC21.03■□□□□ 0.96
ITGB4P16144 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC21.03■□□□□ 0.96
ITGB4P16144 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC21.03■□□□□ 0.96
ITGB4P16144 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 AP002490.2-201ENST00000524791 560 ntBASIC21.03■□□□□ 0.96
ITGB4P16144 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.03■□□□□ 0.96
ITGB4P16144 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.03■□□□□ 0.96
ITGB4P16144 TMEM261P1-201ENST00000604899 340 ntBASIC21.03■□□□□ 0.96
ITGB4P16144 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ITGB4P16144 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC21.03■□□□□ 0.96
ITGB4P16144 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.03■□□□□ 0.96
ITGB4P16144 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGB4P16144 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.03■□□□□ 0.96
ITGB4P16144 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITGB4P16144 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ITGB4P16144 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.02■□□□□ 0.96
ITGB4P16144 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.02■□□□□ 0.96
ITGB4P16144 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.02■□□□□ 0.96
ITGB4P16144 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITGB4P16144 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.02■□□□□ 0.96
ITGB4P16144 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITGB4P16144 MIR4321-201ENST00000592276 80 ntBASIC21.02■□□□□ 0.96
ITGB4P16144 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ITGB4P16144 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.02■□□□□ 0.96
ITGB4P16144 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ITGB4P16144 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITGB4P16144 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.02■□□□□ 0.96
ITGB4P16144 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITGB4P16144 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ITGB4P16144 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ITGB4P16144 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ITGB4P16144 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
ITGB4P16144 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ITGB4P16144 AL139010.1-201ENST00000454878 894 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.01■□□□□ 0.95
ITGB4P16144 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.01■□□□□ 0.95
ITGB4P16144 AL158212.4-201ENST00000624062 1286 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ITGB4P16144 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ITGB4P16144 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.01■□□□□ 0.95
ITGB4P16144 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.01■□□□□ 0.95
ITGB4P16144 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.01■□□□□ 0.95
ITGB4P16144 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ITGB4P16144 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC21.01■□□□□ 0.95
ITGB4P16144 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC21.01■□□□□ 0.95
ITGB4P16144 AC018665.1-201ENST00000622927 1362 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
ITGB4P16144 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC21.01■□□□□ 0.95
ITGB4P16144 BNIP3P42-201ENST00000454982 569 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.01■□□□□ 0.95
ITGB4P16144 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.01■□□□□ 0.95
ITGB4P16144 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ITGB4P16144 AC092552.1-201ENST00000547243 906 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 AC015936.2-201ENST00000593177 259 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 BNIP3P29-201ENST00000598302 571 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 AL365330.1-201ENST00000607459 531 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 MIR8072-201ENST00000614241 80 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 AC011447.5-201ENST00000616168 564 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ITGB4P16144 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
ITGB4P16144 PCGF3-213ENST00000620529 1899 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 AL603756.1-201ENST00000606511 2163 ntBASIC21.01■□□□□ 0.95
ITGB4P16144 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITGB4P16144 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21■□□□□ 0.95
ITGB4P16144 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21■□□□□ 0.95
ITGB4P16144 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms