Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC092171.3-201ENST00000610122 2651 ntBASIC14.62□□□□□ -0.07
SFTPBP07988 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SFTPBP07988 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SFTPBP07988 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SFTPBP07988 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SFTPBP07988 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
SFTPBP07988 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SFTPBP07988 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SFTPBP07988 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SFTPBP07988 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.62□□□□□ -0.07
SFTPBP07988 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 FRMD8P1-201ENST00000440433 1524 ntBASIC14.61□□□□□ -0.07
SFTPBP07988 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.61□□□□□ -0.07
SFTPBP07988 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.61□□□□□ -0.07
SFTPBP07988 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 AC132008.2-207ENST00000454517 770 ntBASIC14.61□□□□□ -0.07
SFTPBP07988 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 AF238378.1-201ENST00000526806 358 ntBASIC14.61□□□□□ -0.07
SFTPBP07988 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.61□□□□□ -0.07
SFTPBP07988 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.61□□□□□ -0.07
SFTPBP07988 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.61□□□□□ -0.07
SFTPBP07988 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.61□□□□□ -0.07
SFTPBP07988 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SFTPBP07988 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.61□□□□□ -0.07
SFTPBP07988 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 AC148477.5-201ENST00000625164 1645 ntBASIC14.61□□□□□ -0.07
SFTPBP07988 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SFTPBP07988 GPR89P-201ENST00000407924 1495 ntBASIC14.61□□□□□ -0.07
SFTPBP07988 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
SFTPBP07988 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.61□□□□□ -0.07
SFTPBP07988 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SFTPBP07988 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
SFTPBP07988 AC068418.2-201ENST00000577309 3703 ntBASIC14.61□□□□□ -0.07
SFTPBP07988 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SFTPBP07988 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SFTPBP07988 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.6□□□□□ -0.07
SFTPBP07988 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.6□□□□□ -0.07
SFTPBP07988 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.6□□□□□ -0.07
SFTPBP07988 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SFTPBP07988 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 AC103702.1-201ENST00000548801 2630 ntBASIC14.6□□□□□ -0.07
SFTPBP07988 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.6□□□□□ -0.07
SFTPBP07988 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.6□□□□□ -0.07
SFTPBP07988 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.6□□□□□ -0.07
SFTPBP07988 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.6□□□□□ -0.07
SFTPBP07988 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.6□□□□□ -0.07
SFTPBP07988 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.6□□□□□ -0.07
SFTPBP07988 AC104692.2-201ENST00000603054 253 ntBASIC14.6□□□□□ -0.07
SFTPBP07988 AL121912.1-201ENST00000603683 238 ntBASIC14.6□□□□□ -0.07
SFTPBP07988 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.6□□□□□ -0.07
SFTPBP07988 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SFTPBP07988 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.6□□□□□ -0.07
SFTPBP07988 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms