Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FAM58DP-201ENST00000428076 619 ntBASIC20.02■□□□□ 0.8
CHGBP05060 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.02■□□□□ 0.8
CHGBP05060 AC069335.1-201ENST00000489972 472 ntBASIC20.02■□□□□ 0.8
CHGBP05060 RARRES2P8-201ENST00000566335 367 ntBASIC20.02■□□□□ 0.8
CHGBP05060 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.02■□□□□ 0.8
CHGBP05060 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.02■□□□□ 0.8
CHGBP05060 AL139011.1-202ENST00000642063 584 ntBASIC20.02■□□□□ 0.8
CHGBP05060 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.02■□□□□ 0.8
CHGBP05060 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CHGBP05060 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHGBP05060 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHGBP05060 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHGBP05060 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHGBP05060 FOXO1B-201ENST00000504678 1527 ntBASIC20.02■□□□□ 0.79
CHGBP05060 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHGBP05060 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHGBP05060 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.01■□□□□ 0.79
CHGBP05060 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHGBP05060 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.01■□□□□ 0.79
CHGBP05060 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.01■□□□□ 0.79
CHGBP05060 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.01■□□□□ 0.79
CHGBP05060 MIR3909-201ENST00000579518 119 ntBASIC20.01■□□□□ 0.79
CHGBP05060 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.01■□□□□ 0.79
CHGBP05060 AC026120.1-201ENST00000611536 926 ntBASIC20.01■□□□□ 0.79
CHGBP05060 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHGBP05060 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHGBP05060 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CHGBP05060 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHGBP05060 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHGBP05060 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHGBP05060 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.01■□□□□ 0.79
CHGBP05060 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20■□□□□ 0.79
CHGBP05060 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CHGBP05060 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20■□□□□ 0.79
CHGBP05060 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20■□□□□ 0.79
CHGBP05060 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 AL139400.1-201ENST00000366220 510 ntBASIC20■□□□□ 0.79
CHGBP05060 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20■□□□□ 0.79
CHGBP05060 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20■□□□□ 0.79
CHGBP05060 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHGBP05060 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20■□□□□ 0.79
CHGBP05060 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20■□□□□ 0.79
CHGBP05060 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20■□□□□ 0.79
CHGBP05060 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 GPAA1P2-202ENST00000606848 1787 ntBASIC20■□□□□ 0.79
CHGBP05060 WASH6P-202ENST00000359512 1437 ntBASIC20■□□□□ 0.79
CHGBP05060 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHGBP05060 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CHGBP05060 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CHGBP05060 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.99■□□□□ 0.79
CHGBP05060 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.99■□□□□ 0.79
CHGBP05060 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.99■□□□□ 0.79
CHGBP05060 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.99■□□□□ 0.79
CHGBP05060 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHGBP05060 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHGBP05060 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.99■□□□□ 0.79
CHGBP05060 CNN2P11-201ENST00000429351 262 ntBASIC19.99■□□□□ 0.79
CHGBP05060 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CHGBP05060 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms