Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
WNT1P04628 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT1P04628 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT1P04628 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
WNT1P04628 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
WNT1P04628 HLA-H-201ENST00000383620 1096 ntBASIC16.32■□□□□ 0.2
WNT1P04628 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
WNT1P04628 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT1P04628 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.32■□□□□ 0.2
WNT1P04628 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.32■□□□□ 0.2
WNT1P04628 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.32■□□□□ 0.2
WNT1P04628 TUBB7P-202ENST00000428444 1305 ntBASIC16.32■□□□□ 0.2
WNT1P04628 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.32■□□□□ 0.2
WNT1P04628 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
WNT1P04628 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.32■□□□□ 0.2
WNT1P04628 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
WNT1P04628 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.32■□□□□ 0.2
WNT1P04628 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.32■□□□□ 0.2
WNT1P04628 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.32■□□□□ 0.2
WNT1P04628 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.32■□□□□ 0.2
WNT1P04628 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
WNT1P04628 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.32■□□□□ 0.2
WNT1P04628 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.32■□□□□ 0.2
WNT1P04628 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.32■□□□□ 0.2
WNT1P04628 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.32■□□□□ 0.2
WNT1P04628 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.32■□□□□ 0.2
WNT1P04628 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.32■□□□□ 0.2
WNT1P04628 TUBB8P7-204ENST00000567960 1332 ntBASIC16.32■□□□□ 0.2
WNT1P04628 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
WNT1P04628 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.32■□□□□ 0.2
WNT1P04628 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
WNT1P04628 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.32■□□□□ 0.2
WNT1P04628 AC022144.1-201ENST00000602255 1580 ntBASIC16.32■□□□□ 0.2
WNT1P04628 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
WNT1P04628 AC013467.2-201ENST00000605472 835 ntBASIC16.32■□□□□ 0.2
WNT1P04628 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT1P04628 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT1P04628 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.32■□□□□ 0.2
WNT1P04628 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT1P04628 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.32■□□□□ 0.2
WNT1P04628 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT1P04628 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 AC092068.3-201ENST00000587894 2016 ntBASIC16.31■□□□□ 0.2
WNT1P04628 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
WNT1P04628 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT1P04628 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.31■□□□□ 0.2
WNT1P04628 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT1P04628 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT1P04628 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT1P04628 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT1P04628 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.31■□□□□ 0.2
WNT1P04628 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.31■□□□□ 0.2
WNT1P04628 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT1P04628 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT1P04628 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.31■□□□□ 0.2
WNT1P04628 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 HLA-V-204ENST00000476601 1289 ntBASIC16.31■□□□□ 0.2
WNT1P04628 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT1P04628 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.31■□□□□ 0.2
WNT1P04628 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
WNT1P04628 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT1P04628 SPTSSB-204ENST00000617024 1292 ntBASIC16.31■□□□□ 0.2
WNT1P04628 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
WNT1P04628 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
WNT1P04628 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
WNT1P04628 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
WNT1P04628 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
WNT1P04628 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 PP12613-201ENST00000424958 2230 ntBASIC16.3■□□□□ 0.2
WNT1P04628 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 FAM220BP-201ENST00000377689 816 ntBASIC16.3■□□□□ 0.2
WNT1P04628 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
WNT1P04628 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms