Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CD4P01730 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.37■□□□□ 0.53
CD4P01730 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.36■□□□□ 0.53
CD4P01730 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CD4P01730 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.36■□□□□ 0.53
CD4P01730 RPL37AP1-201ENST00000412502 279 ntBASIC18.36■□□□□ 0.53
CD4P01730 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CD4P01730 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.36■□□□□ 0.53
CD4P01730 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.36■□□□□ 0.53
CD4P01730 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CD4P01730 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CD4P01730 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.36■□□□□ 0.53
CD4P01730 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.36■□□□□ 0.53
CD4P01730 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CD4P01730 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 AC007541.1-201ENST00000570282 1469 ntBASIC18.36■□□□□ 0.53
CD4P01730 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.36■□□□□ 0.53
CD4P01730 LETM1P2-201ENST00000597330 2178 ntBASIC18.36■□□□□ 0.53
CD4P01730 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.36■□□□□ 0.53
CD4P01730 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.36■□□□□ 0.53
CD4P01730 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.36■□□□□ 0.53
CD4P01730 AC004840.1-201ENST00000636359 365 ntBASIC18.36■□□□□ 0.53
CD4P01730 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.36■□□□□ 0.53
CD4P01730 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.36■□□□□ 0.53
CD4P01730 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD4P01730 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CD4P01730 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
CD4P01730 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CD4P01730 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD4P01730 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD4P01730 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD4P01730 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.35■□□□□ 0.53
CD4P01730 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CD4P01730 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.35■□□□□ 0.53
CD4P01730 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD4P01730 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CD4P01730 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CD4P01730 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CD4P01730 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD4P01730 FAM220BP-201ENST00000377689 816 ntBASIC18.35■□□□□ 0.53
CD4P01730 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD4P01730 PRYP6-201ENST00000514804 343 ntBASIC18.35■□□□□ 0.53
CD4P01730 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.35■□□□□ 0.53
CD4P01730 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CD4P01730 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.35■□□□□ 0.53
CD4P01730 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD4P01730 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CD4P01730 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD4P01730 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD4P01730 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.35■□□□□ 0.53
CD4P01730 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CD4P01730 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CD4P01730 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CD4P01730 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CD4P01730 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CD4P01730 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD4P01730 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
CD4P01730 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.35■□□□□ 0.53
CD4P01730 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CD4P01730 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.34■□□□□ 0.53
CD4P01730 AC138969.3-201ENST00000546612 1459 ntBASIC18.34■□□□□ 0.53
CD4P01730 AC138932.2-201ENST00000548268 1459 ntBASIC18.34■□□□□ 0.53
CD4P01730 AC126755.4-201ENST00000549796 1459 ntBASIC18.34■□□□□ 0.53
CD4P01730 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CD4P01730 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.34■□□□□ 0.53
CD4P01730 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.34■□□□□ 0.53
CD4P01730 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.34■□□□□ 0.53
CD4P01730 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.34■□□□□ 0.53
CD4P01730 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
CD4P01730 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms