Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SIX3O95343 AL031731.1-201ENST00000642131 2094 ntBASIC16.37■□□□□ 0.21
SIX3O95343 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.37■□□□□ 0.21
SIX3O95343 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.37■□□□□ 0.21
SIX3O95343 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.37■□□□□ 0.21
SIX3O95343 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SIX3O95343 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.37■□□□□ 0.21
SIX3O95343 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SIX3O95343 PAUPAR-201ENST00000630360 2965 ntBASIC16.37■□□□□ 0.21
SIX3O95343 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.37■□□□□ 0.21
SIX3O95343 SLC22A20-204ENST00000530038 1673 ntBASIC16.37■□□□□ 0.21
SIX3O95343 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SIX3O95343 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX3O95343 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SIX3O95343 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX3O95343 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.36■□□□□ 0.21
SIX3O95343 GGT4P-201ENST00000623672 1708 ntBASIC16.36■□□□□ 0.21
SIX3O95343 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.36■□□□□ 0.21
SIX3O95343 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 AL139384.1-201ENST00000612143 3047 ntBASIC16.36■□□□□ 0.21
SIX3O95343 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SIX3O95343 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX3O95343 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX3O95343 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.36■□□□□ 0.21
SIX3O95343 LAGE3P1-201ENST00000425356 484 ntBASIC16.36■□□□□ 0.21
SIX3O95343 PMS2P1-201ENST00000431037 1228 ntBASIC16.36■□□□□ 0.21
SIX3O95343 RPS2P1-201ENST00000434010 821 ntBASIC16.36■□□□□ 0.21
SIX3O95343 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.36■□□□□ 0.21
SIX3O95343 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.36■□□□□ 0.21
SIX3O95343 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.36■□□□□ 0.21
SIX3O95343 LINC01711-201ENST00000598340 967 ntBASIC16.36■□□□□ 0.21
SIX3O95343 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
SIX3O95343 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SIX3O95343 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX3O95343 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX3O95343 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX3O95343 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX3O95343 AC131009.4-201ENST00000624048 1740 ntBASIC16.36■□□□□ 0.21
SIX3O95343 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.35■□□□□ 0.21
SIX3O95343 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX3O95343 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.35■□□□□ 0.21
SIX3O95343 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX3O95343 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.35■□□□□ 0.21
SIX3O95343 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.35■□□□□ 0.21
SIX3O95343 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.35■□□□□ 0.21
SIX3O95343 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.35■□□□□ 0.21
SIX3O95343 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.35■□□□□ 0.21
SIX3O95343 UNC93B7-201ENST00000509439 705 ntBASIC16.35■□□□□ 0.21
SIX3O95343 AC107918.2-201ENST00000530817 355 ntBASIC16.35■□□□□ 0.21
SIX3O95343 AC006557.2-201ENST00000592985 1240 ntBASIC16.35■□□□□ 0.21
SIX3O95343 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.35■□□□□ 0.21
SIX3O95343 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.35■□□□□ 0.21
SIX3O95343 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.35■□□□□ 0.21
SIX3O95343 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
SIX3O95343 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 AC007950.2-201ENST00000615045 2347 ntBASIC16.35■□□□□ 0.21
SIX3O95343 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIX3O95343 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms