Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
PCDH8O95206 RBPMS2P1-201ENST00000437762 623 ntBASIC16.68■□□□□ 0.26
PCDH8O95206 FAM86GP-201ENST00000448322 971 ntBASIC16.68■□□□□ 0.26
PCDH8O95206 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDH8O95206 KRT8P23-201ENST00000560090 1207 ntBASIC16.68■□□□□ 0.26
PCDH8O95206 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDH8O95206 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH8O95206 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 AC093512.1-201ENST00000617969 520 ntBASIC16.68■□□□□ 0.26
PCDH8O95206 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
PCDH8O95206 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCDH8O95206 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
PCDH8O95206 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH8O95206 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH8O95206 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH8O95206 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH8O95206 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH8O95206 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDH8O95206 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH8O95206 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDH8O95206 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDH8O95206 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH8O95206 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDH8O95206 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH8O95206 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH8O95206 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDH8O95206 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDH8O95206 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 AC027307.2-201ENST00000591252 911 ntBASIC16.67■□□□□ 0.26
PCDH8O95206 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH8O95206 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH8O95206 PCDHB17P-201ENST00000539533 2393 ntBASIC16.67■□□□□ 0.26
PCDH8O95206 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH8O95206 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH8O95206 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH8O95206 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH8O95206 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH8O95206 AC006277.1-201ENST00000624348 1610 ntBASIC16.67■□□□□ 0.26
PCDH8O95206 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH8O95206 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDH8O95206 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDH8O95206 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PCDH8O95206 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH8O95206 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH8O95206 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH8O95206 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH8O95206 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH8O95206 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.66■□□□□ 0.26
PCDH8O95206 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH8O95206 KRT18P34-201ENST00000488218 1270 ntBASIC16.66■□□□□ 0.26
PCDH8O95206 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH8O95206 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDH8O95206 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDH8O95206 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PCDH8O95206 AC008267.7-201ENST00000624570 1194 ntBASIC16.66■□□□□ 0.26
PCDH8O95206 Z92544.3-201ENST00000624747 417 ntBASIC16.66■□□□□ 0.26
PCDH8O95206 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH8O95206 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
PCDH8O95206 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH8O95206 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms