Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC004817.3-201ENST00000602957 2129 ntBASIC14.59□□□□□ -0.07
UPK1BO75841 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
UPK1BO75841 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 IGHV3-52-201ENST00000519770 353 ntBASIC14.59□□□□□ -0.07
UPK1BO75841 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.59□□□□□ -0.07
UPK1BO75841 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.59□□□□□ -0.07
UPK1BO75841 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.59□□□□□ -0.07
UPK1BO75841 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
UPK1BO75841 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.59□□□□□ -0.07
UPK1BO75841 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.59□□□□□ -0.07
UPK1BO75841 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.59□□□□□ -0.07
UPK1BO75841 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1BO75841 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1BO75841 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
UPK1BO75841 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
UPK1BO75841 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1BO75841 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1BO75841 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1BO75841 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
UPK1BO75841 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UPK1BO75841 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1BO75841 AL671710.1-201ENST00000610245 2349 ntBASIC14.58□□□□□ -0.08
UPK1BO75841 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1BO75841 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1BO75841 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.58□□□□□ -0.08
UPK1BO75841 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
UPK1BO75841 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.58□□□□□ -0.08
UPK1BO75841 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1BO75841 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.58□□□□□ -0.08
UPK1BO75841 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.58□□□□□ -0.08
UPK1BO75841 AC083880.1-201ENST00000608266 535 ntBASIC14.58□□□□□ -0.08
UPK1BO75841 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.58□□□□□ -0.08
UPK1BO75841 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
UPK1BO75841 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
UPK1BO75841 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1BO75841 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1BO75841 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1BO75841 AC005252.3-201ENST00000623855 2258 ntBASIC14.58□□□□□ -0.08
UPK1BO75841 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.58□□□□□ -0.08
UPK1BO75841 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UPK1BO75841 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
UPK1BO75841 AC079781.5-202ENST00000641784 3743 ntBASIC14.57□□□□□ -0.08
UPK1BO75841 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.57□□□□□ -0.08
UPK1BO75841 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.57□□□□□ -0.08
UPK1BO75841 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.57□□□□□ -0.08
UPK1BO75841 MIR4758-201ENST00000577688 71 ntBASIC14.57□□□□□ -0.08
UPK1BO75841 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.57□□□□□ -0.08
UPK1BO75841 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
UPK1BO75841 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
UPK1BO75841 AL139011.1-202ENST00000642063 584 ntBASIC14.57□□□□□ -0.08
UPK1BO75841 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms