Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AL355877.3-201ENST00000622820 899 ntBASIC16.82■□□□□ 0.28
RFPL1O75677 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.82■□□□□ 0.28
RFPL1O75677 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RFPL1O75677 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RFPL1O75677 SNX33P1-201ENST00000592116 1762 ntBASIC16.82■□□□□ 0.28
RFPL1O75677 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFPL1O75677 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.81■□□□□ 0.28
RFPL1O75677 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.81■□□□□ 0.28
RFPL1O75677 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RFPL1O75677 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.81■□□□□ 0.28
RFPL1O75677 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RFPL1O75677 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.81■□□□□ 0.28
RFPL1O75677 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 PMS2P7-201ENST00000506558 1336 ntBASIC16.81■□□□□ 0.28
RFPL1O75677 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.81■□□□□ 0.28
RFPL1O75677 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.81■□□□□ 0.28
RFPL1O75677 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.81■□□□□ 0.28
RFPL1O75677 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.81■□□□□ 0.28
RFPL1O75677 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RFPL1O75677 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.81■□□□□ 0.28
RFPL1O75677 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.81■□□□□ 0.28
RFPL1O75677 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.81■□□□□ 0.28
RFPL1O75677 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 GGT3P-204ENST00000453783 1664 ntBASIC16.81■□□□□ 0.28
RFPL1O75677 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RFPL1O75677 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.81■□□□□ 0.28
RFPL1O75677 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.81■□□□□ 0.28
RFPL1O75677 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFPL1O75677 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.8■□□□□ 0.28
RFPL1O75677 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RFPL1O75677 ZNF259P1-201ENST00000407656 1365 ntBASIC16.8■□□□□ 0.28
RFPL1O75677 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 RPS2P28-201ENST00000314255 741 ntBASIC16.8■□□□□ 0.28
RFPL1O75677 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.8■□□□□ 0.28
RFPL1O75677 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.8■□□□□ 0.28
RFPL1O75677 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RFPL1O75677 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.8■□□□□ 0.28
RFPL1O75677 POLD2P1-201ENST00000511220 997 ntBASIC16.8■□□□□ 0.28
RFPL1O75677 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.8■□□□□ 0.28
RFPL1O75677 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.8■□□□□ 0.28
RFPL1O75677 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.8■□□□□ 0.28
RFPL1O75677 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.8■□□□□ 0.28
RFPL1O75677 AC079776.2-201ENST00000641154 1609 ntBASIC16.8■□□□□ 0.28
RFPL1O75677 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 AL596087.1-201ENST00000400979 1969 ntBASIC16.8■□□□□ 0.28
RFPL1O75677 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RFPL1O75677 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms