Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 RNA5SP419-201ENST00000515908 135 ntBASIC16.82■□□□□ 0.28
GPC4O75487 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC4O75487 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC4O75487 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC4O75487 SLC25A6P4-201ENST00000586535 553 ntBASIC16.82■□□□□ 0.28
GPC4O75487 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC4O75487 AL773604.1-201ENST00000617417 272 ntBASIC16.82■□□□□ 0.28
GPC4O75487 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC4O75487 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC4O75487 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC4O75487 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC4O75487 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GPC4O75487 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC4O75487 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.82■□□□□ 0.28
GPC4O75487 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GPC4O75487 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GPC4O75487 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.81■□□□□ 0.28
GPC4O75487 RNF216P1-203ENST00000404404 2427 ntBASIC16.81■□□□□ 0.28
GPC4O75487 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC4O75487 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC4O75487 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GPC4O75487 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC4O75487 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 RPS2P28-201ENST00000314255 741 ntBASIC16.81■□□□□ 0.28
GPC4O75487 ELK2BP-201ENST00000415014 1224 ntBASIC16.81■□□□□ 0.28
GPC4O75487 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC4O75487 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 AC009078.2-202ENST00000463353 338 ntBASIC16.81■□□□□ 0.28
GPC4O75487 AC012640.2-201ENST00000561606 901 ntBASIC16.81■□□□□ 0.28
GPC4O75487 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC4O75487 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC4O75487 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.81■□□□□ 0.28
GPC4O75487 AL121894.2-201ENST00000602977 491 ntBASIC16.81■□□□□ 0.28
GPC4O75487 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.81■□□□□ 0.28
GPC4O75487 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC4O75487 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GPC4O75487 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
GPC4O75487 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC4O75487 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
GPC4O75487 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GPC4O75487 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC4O75487 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC4O75487 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC4O75487 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC4O75487 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
GPC4O75487 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 NORAD-201ENST00000565493 5339 ntBASIC16.8■□□□□ 0.28
GPC4O75487 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC4O75487 PTCHD3P3-201ENST00000403073 906 ntBASIC16.8■□□□□ 0.28
GPC4O75487 AL031284.1-201ENST00000419297 478 ntBASIC16.8■□□□□ 0.28
GPC4O75487 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC4O75487 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC4O75487 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC4O75487 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.8■□□□□ 0.28
GPC4O75487 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC4O75487 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC4O75487 AC105339.3-201ENST00000560043 636 ntBASIC16.8■□□□□ 0.28
GPC4O75487 TERC-201ENST00000602385 541 ntBASIC16.8■□□□□ 0.28
GPC4O75487 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC4O75487 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
GPC4O75487 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GPC4O75487 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
GPC4O75487 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.8■□□□□ 0.28
GPC4O75487 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GPC4O75487 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC4O75487 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.8■□□□□ 0.28
GPC4O75487 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms