Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.75■□□□□ 0.59
ACTN4O43707 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ACTN4O43707 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
ACTN4O43707 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.74■□□□□ 0.59
ACTN4O43707 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.74■□□□□ 0.59
ACTN4O43707 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.74■□□□□ 0.59
ACTN4O43707 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.74■□□□□ 0.59
ACTN4O43707 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ACTN4O43707 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
ACTN4O43707 GPAA1P2-202ENST00000606848 1787 ntBASIC18.74■□□□□ 0.59
ACTN4O43707 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.74■□□□□ 0.59
ACTN4O43707 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 KRT18P67-201ENST00000432816 1264 ntBASIC18.74■□□□□ 0.59
ACTN4O43707 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.74■□□□□ 0.59
ACTN4O43707 AC079781.3-201ENST00000449110 356 ntBASIC18.74■□□□□ 0.59
ACTN4O43707 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.74■□□□□ 0.59
ACTN4O43707 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.74■□□□□ 0.59
ACTN4O43707 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.74■□□□□ 0.59
ACTN4O43707 AC087641.1-201ENST00000557561 1021 ntBASIC18.74■□□□□ 0.59
ACTN4O43707 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ACTN4O43707 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.74■□□□□ 0.59
ACTN4O43707 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.74■□□□□ 0.59
ACTN4O43707 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ACTN4O43707 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.73■□□□□ 0.59
ACTN4O43707 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
ACTN4O43707 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
ACTN4O43707 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.73■□□□□ 0.59
ACTN4O43707 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.73■□□□□ 0.59
ACTN4O43707 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 AC008741.2-201ENST00000612792 3115 ntBASIC18.73■□□□□ 0.59
ACTN4O43707 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.73■□□□□ 0.59
ACTN4O43707 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ACTN4O43707 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ACTN4O43707 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.73■□□□□ 0.59
ACTN4O43707 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.73■□□□□ 0.59
ACTN4O43707 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.73■□□□□ 0.59
ACTN4O43707 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.73■□□□□ 0.59
ACTN4O43707 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.73■□□□□ 0.59
ACTN4O43707 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.73■□□□□ 0.59
ACTN4O43707 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.73■□□□□ 0.59
ACTN4O43707 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.73■□□□□ 0.59
ACTN4O43707 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ACTN4O43707 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.73■□□□□ 0.59
ACTN4O43707 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.72■□□□□ 0.59
ACTN4O43707 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ACTN4O43707 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.72■□□□□ 0.59
ACTN4O43707 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.72■□□□□ 0.59
ACTN4O43707 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.72■□□□□ 0.59
ACTN4O43707 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.72■□□□□ 0.59
ACTN4O43707 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.72■□□□□ 0.59
ACTN4O43707 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.72■□□□□ 0.59
ACTN4O43707 AC108073.2-201ENST00000464002 357 ntBASIC18.72■□□□□ 0.59
ACTN4O43707 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.72■□□□□ 0.59
ACTN4O43707 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ACTN4O43707 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ACTN4O43707 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms