Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20■□□□□ 0.79
SEMA3EO15041 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SEMA3EO15041 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SEMA3EO15041 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20■□□□□ 0.79
SEMA3EO15041 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20■□□□□ 0.79
SEMA3EO15041 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SEMA3EO15041 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20■□□□□ 0.79
SEMA3EO15041 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SEMA3EO15041 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20■□□□□ 0.79
SEMA3EO15041 AC097493.3-201ENST00000509725 367 ntBASIC20■□□□□ 0.79
SEMA3EO15041 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20■□□□□ 0.79
SEMA3EO15041 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20■□□□□ 0.79
SEMA3EO15041 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20■□□□□ 0.79
SEMA3EO15041 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SEMA3EO15041 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SEMA3EO15041 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SEMA3EO15041 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 GGT4P-201ENST00000623672 1708 ntBASIC19.99■□□□□ 0.79
SEMA3EO15041 AL035456.1-201ENST00000456064 1369 ntBASIC19.99■□□□□ 0.79
SEMA3EO15041 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SEMA3EO15041 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SEMA3EO15041 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.99■□□□□ 0.79
SEMA3EO15041 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.99■□□□□ 0.79
SEMA3EO15041 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
SEMA3EO15041 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.99■□□□□ 0.79
SEMA3EO15041 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.99■□□□□ 0.79
SEMA3EO15041 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SEMA3EO15041 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.99■□□□□ 0.79
SEMA3EO15041 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEMA3EO15041 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SEMA3EO15041 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
SEMA3EO15041 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.98■□□□□ 0.79
SEMA3EO15041 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 AL353705.2-201ENST00000428243 662 ntBASIC19.98■□□□□ 0.79
SEMA3EO15041 AC092580.3-201ENST00000430932 139 ntBASIC19.98■□□□□ 0.79
SEMA3EO15041 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.98■□□□□ 0.79
SEMA3EO15041 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.98■□□□□ 0.79
SEMA3EO15041 INGX-202ENST00000489074 768 ntBASIC19.98■□□□□ 0.79
SEMA3EO15041 NIFKP4-201ENST00000567275 1192 ntBASIC19.98■□□□□ 0.79
SEMA3EO15041 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.98■□□□□ 0.79
SEMA3EO15041 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.98■□□□□ 0.79
SEMA3EO15041 AC003101.2-201ENST00000612557 442 ntBASIC19.98■□□□□ 0.79
SEMA3EO15041 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.98■□□□□ 0.79
SEMA3EO15041 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
SEMA3EO15041 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.98■□□□□ 0.79
SEMA3EO15041 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.98■□□□□ 0.79
SEMA3EO15041 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEMA3EO15041 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 AL603756.1-201ENST00000606511 2163 ntBASIC19.97■□□□□ 0.79
SEMA3EO15041 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.97■□□□□ 0.79
SEMA3EO15041 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.97■□□□□ 0.79
SEMA3EO15041 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.97■□□□□ 0.79
SEMA3EO15041 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.97■□□□□ 0.79
SEMA3EO15041 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.97■□□□□ 0.79
SEMA3EO15041 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.97■□□□□ 0.79
SEMA3EO15041 AC073592.8-201ENST00000624126 511 ntBASIC19.97■□□□□ 0.79
SEMA3EO15041 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.97■□□□□ 0.79
SEMA3EO15041 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.97■□□□□ 0.79
SEMA3EO15041 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA3EO15041 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SEMA3EO15041 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.96■□□□□ 0.79
SEMA3EO15041 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms