Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AKR1C7P-201ENST00000305623 895 ntBASIC16.24■□□□□ 0.19
UBFD1O14562 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.24■□□□□ 0.19
UBFD1O14562 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
UBFD1O14562 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
UBFD1O14562 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.24■□□□□ 0.19
UBFD1O14562 REXO1L6P-202ENST00000619970 1078 ntBASIC16.24■□□□□ 0.19
UBFD1O14562 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.24■□□□□ 0.19
UBFD1O14562 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.24■□□□□ 0.19
UBFD1O14562 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.24■□□□□ 0.19
UBFD1O14562 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
UBFD1O14562 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
UBFD1O14562 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
UBFD1O14562 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 AC006449.6-201ENST00000612330 2296 ntBASIC16.24■□□□□ 0.19
UBFD1O14562 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBFD1O14562 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.23■□□□□ 0.19
UBFD1O14562 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UBFD1O14562 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 LINC00554-201ENST00000564841 3011 ntBASIC16.23■□□□□ 0.19
UBFD1O14562 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.23■□□□□ 0.19
UBFD1O14562 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.23■□□□□ 0.19
UBFD1O14562 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.23■□□□□ 0.19
UBFD1O14562 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.23■□□□□ 0.19
UBFD1O14562 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 UPK3BP1-201ENST00000428678 509 ntBASIC16.23■□□□□ 0.19
UBFD1O14562 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.23■□□□□ 0.19
UBFD1O14562 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.23■□□□□ 0.19
UBFD1O14562 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.23■□□□□ 0.19
UBFD1O14562 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.23■□□□□ 0.19
UBFD1O14562 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.23■□□□□ 0.19
UBFD1O14562 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.23■□□□□ 0.19
UBFD1O14562 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.23■□□□□ 0.19
UBFD1O14562 AC021087.4-201ENST00000563761 564 ntBASIC16.23■□□□□ 0.19
UBFD1O14562 AC091167.2-201ENST00000579581 588 ntBASIC16.23■□□□□ 0.19
UBFD1O14562 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
UBFD1O14562 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.23■□□□□ 0.19
UBFD1O14562 AL121772.3-201ENST00000610840 674 ntBASIC16.23■□□□□ 0.19
UBFD1O14562 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.23■□□□□ 0.19
UBFD1O14562 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.23■□□□□ 0.19
UBFD1O14562 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.23■□□□□ 0.19
UBFD1O14562 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
UBFD1O14562 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBFD1O14562 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UBFD1O14562 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
UBFD1O14562 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.22■□□□□ 0.19
UBFD1O14562 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBFD1O14562 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
UBFD1O14562 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBFD1O14562 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UBFD1O14562 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBFD1O14562 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
UBFD1O14562 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
UBFD1O14562 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.22■□□□□ 0.19
UBFD1O14562 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.22■□□□□ 0.19
UBFD1O14562 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBFD1O14562 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBFD1O14562 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBFD1O14562 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBFD1O14562 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.22■□□□□ 0.19
UBFD1O14562 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.22■□□□□ 0.19
UBFD1O14562 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
UBFD1O14562 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.22■□□□□ 0.19
UBFD1O14562 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
UBFD1O14562 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.22■□□□□ 0.19
UBFD1O14562 CYP2A7P1-201ENST00000595391 815 ntBASIC16.22■□□□□ 0.19
UBFD1O14562 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.22■□□□□ 0.19
UBFD1O14562 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.22■□□□□ 0.19
UBFD1O14562 AL805961.1-202ENST00000641562 540 ntBASIC16.22■□□□□ 0.19
UBFD1O14562 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.22■□□□□ 0.19
UBFD1O14562 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.22■□□□□ 0.19
UBFD1O14562 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBFD1O14562 GPAA1P2-202ENST00000606848 1787 ntBASIC16.22■□□□□ 0.19
UBFD1O14562 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms