Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX39AO00148 AC013467.2-201ENST00000605472 835 ntBASIC18.78■□□□□ 0.6
DDX39AO00148 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX39AO00148 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX39AO00148 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX39AO00148 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 LINC00895-201ENST00000629028 1637 ntBASIC18.78■□□□□ 0.6
DDX39AO00148 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX39AO00148 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DDX39AO00148 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX39AO00148 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
DDX39AO00148 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DDX39AO00148 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.77■□□□□ 0.6
DDX39AO00148 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.77■□□□□ 0.6
DDX39AO00148 TSEN15P1-201ENST00000423257 515 ntBASIC18.77■□□□□ 0.6
DDX39AO00148 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.77■□□□□ 0.6
DDX39AO00148 SPCS2P4-201ENST00000436160 681 ntBASIC18.77■□□□□ 0.6
DDX39AO00148 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 RN7SL589P-201ENST00000481268 310 ntBASIC18.77■□□□□ 0.6
DDX39AO00148 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.77■□□□□ 0.6
DDX39AO00148 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DDX39AO00148 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.77■□□□□ 0.6
DDX39AO00148 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX39AO00148 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.77■□□□□ 0.6
DDX39AO00148 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
DDX39AO00148 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX39AO00148 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
DDX39AO00148 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DDX39AO00148 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
DDX39AO00148 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDX39AO00148 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDX39AO00148 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
DDX39AO00148 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
DDX39AO00148 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.77■□□□□ 0.59
DDX39AO00148 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 AL603756.1-201ENST00000606511 2163 ntBASIC18.76■□□□□ 0.59
DDX39AO00148 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX39AO00148 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 AL139400.1-201ENST00000366220 510 ntBASIC18.76■□□□□ 0.59
DDX39AO00148 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.76■□□□□ 0.59
DDX39AO00148 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX39AO00148 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.76■□□□□ 0.59
DDX39AO00148 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
DDX39AO00148 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX39AO00148 AL627223.1-201ENST00000416693 442 ntBASIC18.76■□□□□ 0.59
DDX39AO00148 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.76■□□□□ 0.59
DDX39AO00148 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX39AO00148 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX39AO00148 AC023141.5-201ENST00000458585 616 ntBASIC18.76■□□□□ 0.59
DDX39AO00148 AC069335.1-201ENST00000489972 472 ntBASIC18.76■□□□□ 0.59
DDX39AO00148 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.76■□□□□ 0.59
DDX39AO00148 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
DDX39AO00148 AC093028.1-201ENST00000622998 982 ntBASIC18.76■□□□□ 0.59
DDX39AO00148 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX39AO00148 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX39AO00148 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX39AO00148 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX39AO00148 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX39AO00148 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX39AO00148 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX39AO00148 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX39AO00148 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms