Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC060834.1-201ENST00000443027 2032 ntBASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 Z82170.1-201ENST00000625081 3192 ntBASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 MIR572-201ENST00000384983 95 ntBASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 NT5C3AP1-201ENST00000394500 1012 ntBASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 HES2-205ENST00000487437 968 ntTSL 3 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 AP006587.1-201ENST00000534129 1502 ntBASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 YBX1P10-201ENST00000444752 975 ntBASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 MIR4767-201ENST00000582827 78 ntBASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 RASSF1-AS1-201ENST00000629828 790 ntBASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 TMEM33-202ENST00000325094 6221 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms