Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 RN7SL828P-201ENST00000607615 303 ntBASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 AC012645.4-201ENST00000610691 1061 ntBASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 MTND6P24-201ENST00000440466 518 ntBASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 SERBP1P5-201ENST00000510079 1181 ntBASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 AC078925.2-201ENST00000624013 1973 ntBASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC144AA2RUR9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 TMPRSS11CP-201ENST00000453277 683 ntBASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 TDG-209ENST00000544861 1387 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC144AA2RUR9 RPL37AP1-201ENST00000412502 279 ntBASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AC005034.1-201ENST00000426657 489 ntBASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 GGT3P-204ENST00000453783 1664 ntBASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AC015922.1-201ENST00000421102 1152 ntBASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 AL589739.1-201ENST00000607720 493 ntBASIC23.76■■□□□ 1.39
CCDC144AA2RUR9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC144AA2RUR9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC144AA2RUR9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms