Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC66A2RUB6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC66A2RUB6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 FAM220CP-201ENST00000395253 831 ntBASIC18.2■□□□□ 0.5
CCDC66A2RUB6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 AC022616.7-201ENST00000525383 220 ntBASIC18.2■□□□□ 0.5
CCDC66A2RUB6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 AC005336.2-201ENST00000593183 939 ntBASIC18.2■□□□□ 0.5
CCDC66A2RUB6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 AC124864.1-201ENST00000623408 392 ntBASIC18.2■□□□□ 0.5
CCDC66A2RUB6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC66A2RUB6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 LINC01238-205ENST00000567549 1107 ntBASIC18.19■□□□□ 0.5
CCDC66A2RUB6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 AC011840.4-201ENST00000578471 627 ntBASIC18.19■□□□□ 0.5
CCDC66A2RUB6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 STK25P1-201ENST00000585406 838 ntBASIC18.19■□□□□ 0.5
CCDC66A2RUB6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC66A2RUB6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 KRT8P10-201ENST00000450021 1447 ntBASIC18.18■□□□□ 0.5
CCDC66A2RUB6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 AL845331.1-201ENST00000424978 1190 ntBASIC18.18■□□□□ 0.5
CCDC66A2RUB6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 DUX4L26-201ENST00000489078 1255 ntBASIC18.18■□□□□ 0.5
CCDC66A2RUB6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms