Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV9S1A1TA0A576 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 HYMAI-201ENST00000635591 3347 ntBASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV9S1A1TA0A576 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 AL732292.2-201ENST00000609649 430 ntBASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 AC131009.4-201ENST00000624048 1740 ntBASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV9S1A1TA0A576 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.83■□□□□ 0.29
TCRBV9S1A1TA0A576 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.83■□□□□ 0.29
TCRBV9S1A1TA0A576 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TCRBV9S1A1TA0A576 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
TCRBV9S1A1TA0A576 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TCRBV9S1A1TA0A576 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TCRBV9S1A1TA0A576 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
TCRBV9S1A1TA0A576 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV9S1A1TA0A576 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV9S1A1TA0A576 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.83■□□□□ 0.28
TCRBV9S1A1TA0A576 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV9S1A1TA0A576 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV9S1A1TA0A576 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV9S1A1TA0A576 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
TCRBV9S1A1TA0A576 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV9S1A1TA0A576 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TCRBV9S1A1TA0A576 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms