Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SCARNA2-201ENST00000458748 420 ntBASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 UNC93B7-201ENST00000509439 705 ntBASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 AC010491.1-201ENST00000563101 2797 ntBASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV7S3A2A0A539 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 LAGE3P1-201ENST00000425356 484 ntBASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 DUSP5P1-201ENST00000441325 1139 ntBASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 RPS15P9-201ENST00000494093 319 ntBASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 SIGLEC29P-201ENST00000599873 1114 ntBASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TCRBV7S3A2A0A539 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 AC091167.2-201ENST00000579581 588 ntBASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 IFNL4P1-201ENST00000607083 540 ntBASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV7S3A2A0A539 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms