Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 UBALD1-205ENST00000590891 2641 ntBASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC196A0A1B0GTZ2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC092171.3-201ENST00000610122 2651 ntBASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 AL031055.1-201ENST00000606362 631 ntBASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 AL031731.1-201ENST00000642131 2094 ntBASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC196A0A1B0GTZ2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC084018.2-201ENST00000613093 2607 ntBASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC196A0A1B0GTZ2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 GGT3P-204ENST00000453783 1664 ntBASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 MIR574-201ENST00000385209 96 ntBASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC140658.5-201ENST00000438532 169 ntBASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC109635.5-201ENST00000533593 962 ntBASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 PDPK2P-202ENST00000562415 1191 ntBASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC196A0A1B0GTZ2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms