Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC012569.1-201ENST00000591191 1524 ntBASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 FLJ38576-201ENST00000623820 2459 ntBASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC007064.4-201ENST00000637740 555 ntBASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL645728.2-201ENST00000641974 660 ntBASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 FLJ16779-201ENST00000612722 7638 ntBASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SNX33P1-201ENST00000592116 1762 ntBASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL691403.2-201ENST00000618460 490 ntBASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL513190.1-201ENST00000621254 727 ntBASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC006538.1-201ENST00000567905 1585 ntBASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 KRT8P39-201ENST00000396270 1433 ntBASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL031432.2-201ENST00000566714 459 ntBASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL928711.1-201ENST00000570165 459 ntBASIC15.21■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms