Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 CLEC4GP1-201ENST00000596555 870 ntBASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 AL391256.1-201ENST00000443260 1855 ntBASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 AL513523.2-202ENST00000427283 2040 ntBASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RHBDD3Q9Y3P4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RHBDD3Q9Y3P4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RHBDD3Q9Y3P4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RHBDD3Q9Y3P4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
RHBDD3Q9Y3P4 PCDHA1-201ENST00000378133 2726 ntBASIC14.71□□□□□ -0.06
RHBDD3Q9Y3P4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
RHBDD3Q9Y3P4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
RHBDD3Q9Y3P4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RHBDD3Q9Y3P4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RHBDD3Q9Y3P4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 AC008741.2-201ENST00000612792 3115 ntBASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 LINC01711-201ENST00000598340 967 ntBASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 AC008608.2-201ENST00000606089 416 ntBASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 REXO1L6P-202ENST00000619970 1078 ntBASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 AC022188.1-201ENST00000620960 1664 ntBASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.7□□□□□ -0.06
RHBDD3Q9Y3P4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 NCF1C-201ENST00000438382 1427 ntBASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 AC007950.2-201ENST00000615045 2347 ntBASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 FGFR3P6-201ENST00000457012 610 ntBASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 KRT18P56-201ENST00000507275 550 ntBASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 SART3-203ENST00000546611 1184 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms