Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HHLA3Q9XRX5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 LINC02012-201ENST00000608206 1725 ntBASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 AC003669.1-201ENST00000334569 611 ntBASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 NUS1P1-201ENST00000446295 882 ntBASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 FOSL1P1-201ENST00000511041 816 ntBASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 STK25P1-201ENST00000585406 838 ntBASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 LINC01711-201ENST00000598340 967 ntBASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 AL121772.3-201ENST00000610840 674 ntBASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 AD001527.2-201ENST00000622994 785 ntBASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.31□□□□□ -0.44
HHLA3Q9XRX5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 PRELID1P1-202ENST00000567272 903 ntBASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 AC073592.5-201ENST00000624854 528 ntBASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms