Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 GPR89P-201ENST00000407924 1495 ntBASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 AD001527.2-201ENST00000622994 785 ntBASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 AC073592.5-201ENST00000624854 528 ntBASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGB4Q9UN71 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 AC132938.5-201ENST00000624980 1813 ntBASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 AC091607.1-201ENST00000490318 1060 ntBASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 AC087388.1-201ENST00000571370 1112 ntBASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB4Q9UN71 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB4Q9UN71 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms