Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 AC006449.5-201ENST00000610658 2098 ntBASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 AC092474.2-201ENST00000424288 719 ntBASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 AL513190.1-201ENST00000621254 727 ntBASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC3Q9UN70 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGC3Q9UN70 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms