Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 AC135050.7-201ENST00000624508 2218 ntBASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 AC093724.1-201ENST00000448659 1027 ntBASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 AP005482.1-201ENST00000563722 1273 ntBASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 AC093726.1-201ENST00000608064 963 ntBASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 COX11-210ENST00000639671 696 ntBASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 AL109936.8-201ENST00000641772 604 ntBASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZNRF3Q9ULT6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 AC007389.4-201ENST00000454674 793 ntBASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 MIR6069-201ENST00000620069 79 ntBASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 AL589702.1-201ENST00000641229 1509 ntBASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNRF3Q9ULT6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 AC234783.1-201ENST00000441761 496 ntBASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 MIR6775-201ENST00000617557 69 ntBASIC19.84■□□□□ 0.77
ZNRF3Q9ULT6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms