Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 AC087163.2-201ENST00000457299 853 ntBASIC15.1■□□□□ 0.01
ZNF346Q9UL40 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 AF228730.7-201ENST00000641842 219 ntBASIC15.1■□□□□ 0.01
ZNF346Q9UL40 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.09■□□□□ 0.01
ZNF346Q9UL40 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 AC026396.1-201ENST00000419388 421 ntBASIC15.09■□□□□ 0.01
ZNF346Q9UL40 LAGE3P1-201ENST00000425356 484 ntBASIC15.09■□□□□ 0.01
ZNF346Q9UL40 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 AL662844.1-201ENST00000546340 181 ntBASIC15.09■□□□□ 0.01
ZNF346Q9UL40 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 AC006557.2-201ENST00000592985 1240 ntBASIC15.09■□□□□ 0.01
ZNF346Q9UL40 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 AC107918.4-202ENST00000641623 219 ntBASIC15.09■□□□□ 0.01
ZNF346Q9UL40 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 PCDHA1-201ENST00000378133 2726 ntBASIC15.09■□□□□ 0.01
ZNF346Q9UL40 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 AC002310.6-201ENST00000624451 1377 ntBASIC15.09■□□□□ 0.01
ZNF346Q9UL40 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF346Q9UL40 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF346Q9UL40 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
ZNF346Q9UL40 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF346Q9UL40 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
ZNF346Q9UL40 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF346Q9UL40 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF346Q9UL40 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF346Q9UL40 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF346Q9UL40 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF346Q9UL40 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ZNF346Q9UL40 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.08■□□□□ 0
ZNF346Q9UL40 ELK2BP-201ENST00000415014 1224 ntBASIC15.08■□□□□ 0
ZNF346Q9UL40 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
ZNF346Q9UL40 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
ZNF346Q9UL40 AL160237.2-201ENST00000556165 472 ntBASIC15.08■□□□□ 0
ZNF346Q9UL40 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.08■□□□□ 0
ZNF346Q9UL40 AL031008.1-201ENST00000619963 541 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms