Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC1Q9NTX5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.33■□□□□ 0.85
ECHDC1Q9NTX5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 ALOX12P2-203ENST00000570921 1945 ntBASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ECHDC1Q9NTX5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC1Q9NTX5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 YBX2P1-201ENST00000394192 760 ntBASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 AC112191.1-201ENST00000523689 701 ntBASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 AC091812.2-201ENST00000619081 385 ntBASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC1Q9NTX5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 AC002056.1-201ENST00000395613 760 ntBASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms